Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SNORA60-201ENST00000362396 134 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RNU6-989P-201ENST00000362756 107 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RNU5A-8P-201ENST00000364102 114 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RNU6-1322P-201ENST00000364309 107 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RNU6-169P-201ENST00000365336 107 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RNU6-108P-201ENST00000365558 107 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC019155.1-201ENST00000382242 574 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 Y_RNA.493-201ENST00000384422 102 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 SNORA70E-201ENST00000384492 135 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RNU1-89P-201ENST00000384592 164 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RPL23AP48-201ENST00000406913 488 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC016397.1-201ENST00000412463 242 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AMD1P2-201ENST00000412936 992 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC138393.2-201ENST00000414742 246 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RPL23AP38-201ENST00000423801 469 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC137499.1-201ENST00000427602 88 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC068287.1-201ENST00000430283 295 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 TIMM9P1-201ENST00000436122 256 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RPL23AP2-201ENST00000471227 466 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 UQCRHP4-201ENST00000471686 272 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RN7SL271P-201ENST00000487601 295 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 VWA8P1-201ENST00000510889 176 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC093840.1-201ENST00000511599 336 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RNU6-1281P-201ENST00000516223 105 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RNU6-358P-201ENST00000516564 75 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RNA5SP143-201ENST00000516936 115 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 RN7SL600P-201ENST00000581811 299 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC008752.3-201ENST00000588113 712 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC007621.1-201ENST00000604544 437 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AL136363.1-201ENST00000605349 337 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 ARF4P1-201ENST00000605447 541 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AC093788.1-201ENST00000609356 927 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 MIR486-1-201ENST00000612171 68 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 AL020991.1-201ENST00000612314 373 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 SNORA72.1-201ENST00000363485 129 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RNA5SP322-201ENST00000363617 119 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RNU6-877P-201ENST00000383868 107 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 MIR19A-201ENST00000384878 82 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RNU6-821P-201ENST00000390995 107 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RPS4XP8-201ENST00000402039 771 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 GPR143P-201ENST00000434155 205 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 TBCAP1-201ENST00000436520 327 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 HMGB1P37-201ENST00000439613 609 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC093156.1-201ENST00000440382 670 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RAC1P7-201ENST00000445367 377 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 MTND5P20-201ENST00000448677 143 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RPS17P13-201ENST00000448974 407 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC117522.1-201ENST00000509821 380 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC021146.1-201ENST00000511202 716 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 FTH1P21-201ENST00000512179 511 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC017037.2-201ENST00000513850 890 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RNU6-1220P-201ENST00000517126 108 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC090572.1-201ENST00000519251 160 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC104383.1-201ENST00000530297 370 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AP003385.6-201ENST00000531603 374 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AL359212.1-201ENST00000556608 614 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms