Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC002550.2-201ENST00000621246 394 ntBASIC4.28□□□□□ -1.72
SIMC1Q8NDZ2 AL160413.1-201ENST00000622780 310 ntBASIC4.28□□□□□ -1.72
SIMC1Q8NDZ2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIMC1Q8NDZ2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SIMC1Q8NDZ2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIMC1Q8NDZ2 AL645937.1-201ENST00000641739 1652 ntBASIC4.28□□□□□ -1.72
SIMC1Q8NDZ2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
SIMC1Q8NDZ2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
SIMC1Q8NDZ2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 OR9R1P-201ENST00000412200 877 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 EIF1P3-201ENST00000423841 334 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 EZH2P1-201ENST00000431167 291 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AL359265.2-201ENST00000434367 631 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 RPL31P50-201ENST00000471002 296 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 NIPA2P2-201ENST00000496376 1083 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AC078918.1-201ENST00000498515 228 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 RN7SKP92-201ENST00000517266 244 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AP001781.1-201ENST00000530977 207 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AP004242.1-201ENST00000533701 349 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AL121603.1-201ENST00000553815 142 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 SUB1P2-201ENST00000556401 297 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 RN7SL690P-201ENST00000582087 240 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AC018638.8-201ENST00000588755 281 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 BNIP3P22-201ENST00000593399 556 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 VN1R80P-201ENST00000597126 338 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 AL049780.3-201ENST00000624612 1583 ntBASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SIMC1Q8NDZ2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 Y_RNA.58-201ENST00000362807 102 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 Y_RNA.154-201ENST00000363624 102 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 RNY3P1-201ENST00000365085 102 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 RNY3-201ENST00000365484 102 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 Y_RNA.381-201ENST00000365666 102 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 RNU1-39P-201ENST00000383897 165 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 Y_RNA.419-201ENST00000384041 102 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 SNORA70F-201ENST00000384142 135 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 Y_RNA.490-201ENST00000384413 102 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 RNA5SP332-201ENST00000391063 115 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 RNU6-952P-201ENST00000391164 108 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AL583834.1-201ENST00000406943 343 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 RN7SKP167-201ENST00000411047 285 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AC127391.1-201ENST00000411737 98 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AC099677.1-201ENST00000420575 175 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 RSL24D1P6-201ENST00000426934 401 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 SEPT14P3-201ENST00000439401 183 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 RPL23AP93-201ENST00000440847 484 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AL732372.2-207ENST00000445840 183 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AC140076.1-201ENST00000449897 361 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 SEPT14P2-201ENST00000453405 183 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 SNRPGP5-201ENST00000456003 220 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AC053481.1-201ENST00000467217 306 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AC005921.1-201ENST00000510589 286 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 SEPT14P4-201ENST00000513445 186 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 FO082796.1-201ENST00000523795 183 ntBASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.26□□□□□ -1.73
SIMC1Q8NDZ2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms