Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 VDAC1P3-201ENST00000434069 851 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 RPL35AP22-201ENST00000436855 335 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AL138799.3-201ENST00000438968 350 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 THAP5P1-201ENST00000439089 262 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC010655.1-201ENST00000449336 292 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC008155.2-201ENST00000464337 397 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 TMED11P-201ENST00000479478 690 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AL024509.2-201ENST00000493462 493 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 VN1R104P-201ENST00000505115 1009 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AF131216.2-201ENST00000512316 564 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AP003497.1-201ENST00000528472 562 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 NCAPGP2-201ENST00000557911 754 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 OR4K8P-201ENST00000578842 1048 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC060771.1-201ENST00000582031 164 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 U73023.1-201ENST00000603134 700 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AL359999.1-201ENST00000604513 294 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC068276.1-201ENST00000605793 379 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AL355365.1-201ENST00000616480 294 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 MIR6130-201ENST00000619419 109 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AL360181.4-201ENST00000621752 134 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 MIR4275-201ENST00000636486 87 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AL645937.1-201ENST00000641739 1652 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 Y_RNA.77-201ENST00000362962 107 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 RNU1-33P-201ENST00000364249 162 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 RNU4-91P-201ENST00000364778 135 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 RNU6-114P-201ENST00000384704 105 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 MIR3074-201ENST00000384885 81 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 SOD2P1-201ENST00000396543 562 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 TOMM22P1-201ENST00000418578 312 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 DUTP6-201ENST00000425573 462 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 MTCO1P42-201ENST00000457379 726 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 RN7SL807P-201ENST00000470923 297 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AC096751.1-202ENST00000502691 1067 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 MTND5P13-201ENST00000513046 1079 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AC022483.1-201ENST00000514020 567 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 RNU6-1003P-201ENST00000517099 105 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 FAM60BP-201ENST00000578364 658 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AL358072.1-201ENST00000604156 575 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 SNORA62.6-201ENST00000606322 83 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AC027807.2-201ENST00000616099 408 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 AL590240.3-201ENST00000621416 943 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.04□□□□□ -1.76
HERC6Q8IVU3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HERC6Q8IVU3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 SNORD9-201ENST00000362566 104 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 RNU5E-5P-201ENST00000365379 116 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 RNU6-809P-201ENST00000384461 107 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 RNU1-89P-201ENST00000384592 164 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 RNU6-516P-201ENST00000411381 104 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AMD1P2-201ENST00000412936 992 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 BX842559.1-201ENST00000419615 532 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC011742.1-201ENST00000431448 434 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC004866.2-201ENST00000438285 481 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 RPS17P13-201ENST00000448974 407 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 RPL21P10-201ENST00000463521 490 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC117532.1-201ENST00000514638 323 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC026801.2-201ENST00000515352 425 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC103843.2-201ENST00000530523 682 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms