Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 SNORA6-201ENST00000384033 151 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 MIR524-201ENST00000385242 87 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 TAS2R15P-201ENST00000390674 928 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 GSTA9P-201ENST00000406231 611 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 HMGB1P15-201ENST00000453854 435 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 HMGB1P22-201ENST00000505315 124 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 MIR5089-201ENST00000580047 84 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 PCNAP1-202ENST00000595299 752 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 NUTF2P8-201ENST00000604593 363 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 AC112503.2-201ENST00000609005 552 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 YWHAEP7-203ENST00000622054 312 ntBASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC171Q6TFL3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
CCDC171Q6TFL3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC171Q6TFL3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 RNA5SP432-201ENST00000362480 116 ntBASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 RNA5SP38-201ENST00000410750 119 ntBASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 AC022690.1-201ENST00000526681 550 ntBASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 RPS3AP23-202ENST00000574601 686 ntBASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 MIR4524B-201ENST00000581569 115 ntBASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 MIR4448-201ENST00000584360 86 ntBASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 AC245036.5-201ENST00000596330 847 ntBASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 NTAN1P1-201ENST00000603150 646 ntBASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC171Q6TFL3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 RNU6-1251P-201ENST00000364502 107 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 RNA5SP88-201ENST00000365560 109 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 RNU2-21P-201ENST00000410368 188 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 AC096632.1-201ENST00000427395 310 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 AC009237.8-201ENST00000445492 379 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 RPS24P6-201ENST00000452670 400 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 AC010301.1-201ENST00000473936 355 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 AC108734.3-201ENST00000481241 1165 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CCDC171Q6TFL3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AL596028.1-201ENST00000326971 197 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 SNORD65-201ENST00000391079 73 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC073264.1-201ENST00000411508 416 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 RPS15AP40-201ENST00000419621 391 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AP004371.1-201ENST00000525240 214 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 SNRPGP19-201ENST00000603826 189 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 APOOP1-201ENST00000604695 592 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AP001521.1-201ENST00000609150 300 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC106028.5-201ENST00000610332 395 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AL133370.2-201ENST00000619934 439 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC241585.2-209ENST00000638217 143 ntBASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC171Q6TFL3 AC007342.9-201ENST00000623877 1385 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 Y_RNA.62-201ENST00000362840 99 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 NUP35P2-201ENST00000416748 943 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 OR51AB1P-201ENST00000429046 620 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 RPS7P2-201ENST00000435134 607 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 AC004866.2-201ENST00000438285 481 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 snoU13.23-201ENST00000458863 104 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 RPL21P99-201ENST00000480369 423 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 GAPDHP39-201ENST00000481866 979 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 RNA5SP364-201ENST00000516938 78 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 OR11H5P-201ENST00000554039 926 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 DEFB122-202ENST00000569013 197 ntBASIC2.37□□□□□ -2.03
CCDC171Q6TFL3 MIR3935-201ENST00000583472 104 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms