Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP188Q5SRE5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.34□□□□□ -2.03
NUP188Q5SRE5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
NUP188Q5SRE5 MIR4512-201ENST00000583257 77 ntBASIC2.34□□□□□ -2.03
NUP188Q5SRE5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUP188Q5SRE5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
NUP188Q5SRE5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
NUP188Q5SRE5 AC240504.1-201ENST00000395709 845 ntBASIC2.34□□□□□ -2.04
NUP188Q5SRE5 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.34□□□□□ -2.04
NUP188Q5SRE5 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.34□□□□□ -2.04
NUP188Q5SRE5 AL021397.1-201ENST00000451806 248 ntBASIC2.34□□□□□ -2.04
NUP188Q5SRE5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.34□□□□□ -2.04
NUP188Q5SRE5 RPS26P21-201ENST00000475397 348 ntBASIC2.34□□□□□ -2.04
NUP188Q5SRE5 AC087441.2-201ENST00000529141 262 ntBASIC2.34□□□□□ -2.04
NUP188Q5SRE5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.34□□□□□ -2.04
NUP188Q5SRE5 AC011468.4-201ENST00000603942 409 ntBASIC2.34□□□□□ -2.04
NUP188Q5SRE5 AC009318.3-201ENST00000616916 503 ntBASIC2.34□□□□□ -2.04
NUP188Q5SRE5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
NUP188Q5SRE5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 RNA5SP295-201ENST00000362655 121 ntBASIC2.33□□□□□ -2.04
NUP188Q5SRE5 RNU2-20P-201ENST00000410425 191 ntBASIC2.33□□□□□ -2.04
NUP188Q5SRE5 EIF1AXP1-201ENST00000419267 435 ntBASIC2.33□□□□□ -2.04
NUP188Q5SRE5 AC092832.1-201ENST00000422934 400 ntBASIC2.33□□□□□ -2.04
NUP188Q5SRE5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 AL512598.1-201ENST00000610158 273 ntBASIC2.33□□□□□ -2.04
NUP188Q5SRE5 VN1R74P-201ENST00000613259 503 ntBASIC2.33□□□□□ -2.04
NUP188Q5SRE5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.33□□□□□ -2.04
NUP188Q5SRE5 Y_RNA.327-201ENST00000365201 102 ntBASIC2.32□□□□□ -2.04
NUP188Q5SRE5 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
NUP188Q5SRE5 RNU2-37P-201ENST00000410695 177 ntBASIC2.32□□□□□ -2.04
NUP188Q5SRE5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.32□□□□□ -2.04
NUP188Q5SRE5 AC023128.2-201ENST00000420880 1223 ntBASIC2.32□□□□□ -2.04
NUP188Q5SRE5 AC078918.1-201ENST00000498515 228 ntBASIC2.32□□□□□ -2.04
NUP188Q5SRE5 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.32□□□□□ -2.04
NUP188Q5SRE5 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NUP188Q5SRE5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.32□□□□□ -2.04
NUP188Q5SRE5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.32□□□□□ -2.04
NUP188Q5SRE5 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.32□□□□□ -2.04
NUP188Q5SRE5 AC022709.1-201ENST00000615967 87 ntBASIC2.32□□□□□ -2.04
NUP188Q5SRE5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.32□□□□□ -2.04
NUP188Q5SRE5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 SET-203ENST00000372688 801 ntTSL 2 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC108734.3-201ENST00000481241 1165 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 MTCYBP17-201ENST00000503579 789 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 Y_RNA.354-201ENST00000365448 111 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 MIR1323-201ENST00000408090 73 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 POLR2J4-204ENST00000418424 324 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC027124.2-201ENST00000428249 105 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 XKRY2-201ENST00000442362 1093 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 COX6CP5-201ENST00000527162 228 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC123786.2-201ENST00000603459 275 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AL645939.4-201ENST00000604495 135 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC010200.2-201ENST00000605098 235 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 KATNBL1P1-201ENST00000605192 748 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC092159.4-201ENST00000624944 550 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 CFTRP2-201ENST00000634304 199 ntBASIC2.31□□□□□ -2.04
NUP188Q5SRE5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.31□□□□□ -2.04
NUP188Q5SRE5 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.3□□□□□ -2.04
NUP188Q5SRE5 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NUP188Q5SRE5 MIR124-3-201ENST00000384866 87 ntBASIC2.3□□□□□ -2.04
NUP188Q5SRE5 USP9YP27-201ENST00000418455 438 ntBASIC2.3□□□□□ -2.04
NUP188Q5SRE5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.3□□□□□ -2.04
NUP188Q5SRE5 AC007395.1-201ENST00000451333 677 ntBASIC2.3□□□□□ -2.04
NUP188Q5SRE5 CBX3P4-201ENST00000538909 354 ntBASIC2.3□□□□□ -2.04
NUP188Q5SRE5 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.3□□□□□ -2.04
NUP188Q5SRE5 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.3□□□□□ -2.04
NUP188Q5SRE5 AL133393.1-201ENST00000603277 287 ntBASIC2.3□□□□□ -2.04
NUP188Q5SRE5 AC005296.1-201ENST00000616145 209 ntBASIC2.3□□□□□ -2.04
NUP188Q5SRE5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.3□□□□□ -2.04
NUP188Q5SRE5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUP188Q5SRE5 AC114546.3-201ENST00000623582 1734 ntBASIC2.29□□□□□ -2.04
NUP188Q5SRE5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NUP188Q5SRE5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP188Q5SRE5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP188Q5SRE5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.29□□□□□ -2.04
NUP188Q5SRE5 AC022431.1-201ENST00000450941 438 ntBASIC2.29□□□□□ -2.04
NUP188Q5SRE5 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.29□□□□□ -2.04
NUP188Q5SRE5 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.29□□□□□ -2.04
NUP188Q5SRE5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NUP188Q5SRE5 AC090751.1-201ENST00000566966 267 ntBASIC2.29□□□□□ -2.04
NUP188Q5SRE5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP188Q5SRE5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms