Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MTCYBP17-201ENST00000503579 789 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX4Q33E94 HSPD1P15-201ENST00000505573 1122 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 HMGB1P28-201ENST00000507778 552 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AC026412.2-201ENST00000512270 1075 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX4Q33E94 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AL355836.1-201ENST00000555951 870 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AADACP1-206ENST00000561502 1193 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AL132657.2-201ENST00000564417 358 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 DUXAP4-201ENST00000603046 613 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AC069304.2-201ENST00000605154 435 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 RNU4-5P-201ENST00000607255 135 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AL159169.3-201ENST00000608871 561 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX4Q33E94 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AC084757.4-201ENST00000616350 526 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AL353748.2-201ENST00000622148 471 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AC091953.5-201ENST00000622919 233 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AC009039.2-201ENST00000624524 529 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 MIR1322-201ENST00000638013 71 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.69□□□□□ -1.98
RFX4Q33E94 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RFX4Q33E94 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.68□□□□□ -1.98
RFX4Q33E94 OR5BR1P-201ENST00000524992 1330 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 ZNF29P-201ENST00000225587 168 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RFX4Q33E94 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RFX4Q33E94 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RFX4Q33E94 SNORA71.3-201ENST00000362582 128 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 RNU6-1242P-201ENST00000391052 103 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 DHFRP6-201ENST00000401776 268 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 ERHP2-201ENST00000402323 299 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AL136310.1-201ENST00000404926 654 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR1289-1-201ENST00000408836 144 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MTCO3P12-201ENST00000416718 547 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 RPL21P32-201ENST00000419877 477 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AC092427.1-201ENST00000439177 601 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AL591503.2-201ENST00000442314 1005 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX4Q33E94 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RFX4Q33E94 MTCYBP11-201ENST00000447254 1109 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AL589880.1-201ENST00000448271 287 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.68□□□□□ -1.98
RFX4Q33E94 AC096751.1-202ENST00000502691 1067 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 TMEM251P1-201ENST00000503717 318 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX4Q33E94 RNY4P37-201ENST00000516225 96 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 ERHP1-201ENST00000523006 310 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 SLC2A13P1-201ENST00000531560 322 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AC005832.3-201ENST00000537929 631 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 DNAJC8P1-201ENST00000554535 372 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR4509-3-201ENST00000578671 94 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR4444-1-201ENST00000581696 74 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR3670-2-201ENST00000582974 65 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR4509-2-201ENST00000583920 94 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR3670-1-201ENST00000584160 65 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR4444-2-201ENST00000584390 74 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR3670-3-201ENST00000584855 65 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 BNIP3P24-201ENST00000593398 557 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AC011458.1-201ENST00000604034 617 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR3670-4-201ENST00000612260 65 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AC004696.1-201ENST00000614345 607 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 MIR4509-1-201ENST00000618224 94 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 AC095031.1-201ENST00000623685 672 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 OR8B1P-202ENST00000641132 1178 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RFX4Q33E94 CDR1-202ENST00000625883 1485 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RFX4Q33E94 AC233263.6-201ENST00000631132 1963 ntBASIC2.68□□□□□ -1.98
RFX4Q33E94 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RFX4Q33E94 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.67□□□□□ -1.98
RFX4Q33E94 AC091564.4-201ENST00000533934 2194 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.67□□□□□ -1.98
RFX4Q33E94 SNORA9.2-201ENST00000365361 133 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 SNORD116.1-201ENST00000365628 92 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RFX4Q33E94 SNORD21-201ENST00000383953 95 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 SNORD51-201ENST00000384320 80 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 RPL21P75-201ENST00000396599 483 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 RPL21P28-201ENST00000401418 483 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 AL592114.1-201ENST00000403842 483 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 AL590084.1-201ENST00000407885 387 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 RNU2-15P-201ENST00000410692 191 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 RNA5SP120-201ENST00000410900 112 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 RNA5SP492-201ENST00000411330 114 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 RPS3AP25-201ENST00000411660 793 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 MTATP6P20-201ENST00000414147 562 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 ATG3P1-201ENST00000419507 911 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 AL158156.1-201ENST00000422509 473 ntBASIC2.67□□□□□ -1.98
RFX4Q33E94 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms