Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC138915.1-201ENST00000565427 1685 ntBASIC2.6□□□□□ -1.99
CSNK1A1P48729 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CSNK1A1P48729 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSNK1A1P48729 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CSNK1A1P48729 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSNK1A1P48729 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSNK1A1P48729 RNU4-51P-201ENST00000364206 140 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 Y_RNA.408-201ENST00000383987 102 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 RNA5SP492-201ENST00000411330 114 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AL161449.1-201ENST00000414531 1199 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 RPL7P30-201ENST00000420888 709 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 HMGN2P30-201ENST00000423237 256 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AL390023.1-201ENST00000428836 262 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 NDUFB4P6-201ENST00000436819 366 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 AL121871.1-201ENST00000443413 436 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 OR6K1P-201ENST00000456766 971 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AL031183.1-201ENST00000457667 207 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 RPL21P41-201ENST00000459863 264 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AP004217.1-201ENST00000480579 346 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 OR4G11P-201ENST00000492842 939 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC010460.2-201ENST00000509054 677 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 SCGB1D5P-201ENST00000515134 247 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 RN7SKP31-201ENST00000516354 278 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 SNORA70.16-201ENST00000516390 95 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC091163.3-201ENST00000518269 1144 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC087808.1-201ENST00000520501 361 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC010376.1-201ENST00000522101 334 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 HSPE1P20-201ENST00000538133 289 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 OR7K1P-201ENST00000546439 926 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 YWHAZP1-201ENST00000556286 722 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC034105.3-201ENST00000565294 442 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC011260.1-201ENST00000578420 472 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CSNK1A1P48729 AC012119.1-201ENST00000603184 222 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 HSPE1P7-201ENST00000604681 321 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 CYCSP41-201ENST00000616920 296 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 AL356585.4-201ENST00000623078 1229 ntBASIC2.59□□□□□ -1.99
CSNK1A1P48729 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CSNK1A1P48729 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
CSNK1A1P48729 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSNK1A1P48729 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CSNK1A1P48729 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CSNK1A1P48729 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.58□□□□□ -2
CSNK1A1P48729 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CSNK1A1P48729 MIR506-201ENST00000384998 124 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 SNORA40.2-201ENST00000390847 128 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.58□□□□□ -2
CSNK1A1P48729 MIR1290-201ENST00000408735 78 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.58□□□□□ -2
CSNK1A1P48729 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.58□□□□□ -2
CSNK1A1P48729 RNU2-42P-201ENST00000410697 113 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 RPL7P8-201ENST00000411964 730 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AC007435.1-201ENST00000421086 415 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.58□□□□□ -2
CSNK1A1P48729 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSNK1A1P48729 RNF2P1-201ENST00000442955 1010 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 Z96811.1-201ENST00000445880 108 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 USP9YP34-201ENST00000453983 808 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.58□□□□□ -2
CSNK1A1P48729 RFC5P1-201ENST00000454419 874 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 Z82190.1-201ENST00000454534 490 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 MTATP6P14-201ENST00000455189 673 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.58□□□□□ -2
CSNK1A1P48729 PNPLA4P1-201ENST00000458328 305 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.58□□□□□ -2
CSNK1A1P48729 AC079203.1-201ENST00000487972 404 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AC083906.5-201ENST00000503722 328 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSNK1A1P48729 MTND3P3-201ENST00000505004 126 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.58□□□□□ -2
CSNK1A1P48729 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.58□□□□□ -2
CSNK1A1P48729 SNORA70.24-201ENST00000517233 118 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.58□□□□□ -2
CSNK1A1P48729 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
CSNK1A1P48729 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.58□□□□□ -2
CSNK1A1P48729 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.58□□□□□ -2
CSNK1A1P48729 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.58□□□□□ -2
CSNK1A1P48729 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSNK1A1P48729 AC125611.1-201ENST00000549563 229 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.58□□□□□ -2
CSNK1A1P48729 NBEAP1-201ENST00000554452 979 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 TMF1P1-201ENST00000576058 373 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 MIR3609-201ENST00000582661 80 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.58□□□□□ -2
CSNK1A1P48729 MIR4325-201ENST00000583049 90 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.58□□□□□ -2
CSNK1A1P48729 AC019159.1-201ENST00000605094 187 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AL133507.1-201ENST00000605269 557 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms