Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC9P31274 RNU6-851P-201ENST00000384565 107 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 DHFRP6-201ENST00000401776 268 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AL603766.1-201ENST00000407763 664 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 RPL31P45-201ENST00000419532 356 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 TXNL1P1-201ENST00000429528 554 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 FTH1P6-201ENST00000430768 320 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC9P31274 EEF1E1P1-201ENST00000446998 430 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AL136097.1-201ENST00000456945 913 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 PABPC1P3-201ENST00000469174 459 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 RPL31P50-201ENST00000471002 296 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 SYPL1P1-201ENST00000473622 768 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC9P31274 AC111000.2-201ENST00000507775 550 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 LTV1P1-201ENST00000510683 1237 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HOXC9P31274 AC006499.2-201ENST00000513470 337 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC9P31274 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC9P31274 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC9P31274 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC9P31274 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC9P31274 AC104027.1-201ENST00000521887 300 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC9P31274 COX6CP8-201ENST00000522620 226 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AC239860.2-201ENST00000525886 270 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC9P31274 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC9P31274 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC9P31274 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC9P31274 AC013444.2-201ENST00000603317 787 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 OR2AS2P-201ENST00000606902 342 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 RMST_8.1-201ENST00000610287 165 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AC004223.4-201ENST00000612426 332 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AC122133.1-201ENST00000613964 233 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AL031667.3-201ENST00000620124 655 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 AC091931.1-201ENST00000623488 728 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC9P31274 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC9P31274 OR11H5P-202ENST00000641612 1325 ntBASIC3.94□□□□□ -1.78
HOXC9P31274 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC9P31274 AC018529.3-201ENST00000624212 2254 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC9P31274 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC9P31274 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC9P31274 RNA5SP126-201ENST00000365092 109 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 RPL31P2-201ENST00000413849 377 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 RPL7P30-201ENST00000420888 709 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 NUP35P1-201ENST00000422734 947 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC9P31274 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXC9P31274 RPL21P40-201ENST00000428586 483 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 MTND1P20-201ENST00000430341 950 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 UBE2D3P4-201ENST00000441973 436 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 MEMO1P3-201ENST00000459811 302 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 ST13P14-201ENST00000474095 734 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 KC877373.1-201ENST00000479066 408 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 RN7SL429P-201ENST00000479090 223 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 RPL21P103-201ENST00000479921 488 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 RN7SL489P-201ENST00000486185 223 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 RN7SL327P-201ENST00000488659 223 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AC114981.1-201ENST00000503897 678 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXC9P31274 Y_RNA.688-201ENST00000516565 95 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXC9P31274 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.93□□□□□ -1.78
HOXC9P31274 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC9P31274 AC109446.2-201ENST00000567872 497 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AC135628.1-201ENST00000568867 534 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AC008507.1-201ENST00000587506 734 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AL596327.1-201ENST00000603629 213 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 Z94722.1-201ENST00000604328 474 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AC121247.2-201ENST00000604776 136 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AC010738.1-201ENST00000604970 987 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AC105429.2-201ENST00000610567 517 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 RN7SL853P-201ENST00000617250 223 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AC007494.3-201ENST00000624660 743 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXC9P31274 CYP3A51P-201ENST00000633513 256 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXC9P31274 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXC9P31274 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC9P31274 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC9P31274 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
HOXC9P31274 GDI2P1-201ENST00000429312 1336 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 PWAR6-201ENST00000552334 4618 ntBASIC3.93□□□□□ -1.78
HOXC9P31274 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC9P31274 MTCO1P23-201ENST00000415223 1526 ntBASIC3.92□□□□□ -1.78
HOXC9P31274 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC9P31274 RPL21P132-201ENST00000331267 462 ntBASIC3.92□□□□□ -1.78
HOXC9P31274 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.92□□□□□ -1.78
HOXC9P31274 MIR184-201ENST00000384962 84 ntBASIC3.92□□□□□ -1.78
HOXC9P31274 RPL31P1-201ENST00000398116 372 ntBASIC3.92□□□□□ -1.78
HOXC9P31274 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC9P31274 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.92□□□□□ -1.78
HOXC9P31274 AC090960.1-201ENST00000421072 306 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms