Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NIFKP8-201ENST00000560500 874 ntBASIC3.2□□□□□ -1.9
TOP1P11387 AC023825.1-201ENST00000566704 1030 ntBASIC3.2□□□□□ -1.9
TOP1P11387 AC124283.4-201ENST00000581815 456 ntBASIC3.2□□□□□ -1.9
TOP1P11387 MIR3605-201ENST00000583214 100 ntBASIC3.2□□□□□ -1.9
TOP1P11387 AC104763.3-201ENST00000613765 618 ntBASIC3.2□□□□□ -1.9
TOP1P11387 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.2□□□□□ -1.9
TOP1P11387 AC007998.5-201ENST00000622938 237 ntBASIC3.2□□□□□ -1.9
TOP1P11387 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.2□□□□□ -1.9
TOP1P11387 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TOP1P11387 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.2□□□□□ -1.9
TOP1P11387 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TOP1P11387 MIR620-201ENST00000385232 95 ntBASIC3.19□□□□□ -1.9
TOP1P11387 MIR493-201ENST00000385254 89 ntBASIC3.19□□□□□ -1.9
TOP1P11387 SNORA26.7-201ENST00000391288 122 ntBASIC3.19□□□□□ -1.9
TOP1P11387 NUP35P1-201ENST00000422734 947 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC019097.1-201ENST00000424783 735 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC063976.3-201ENST00000426849 329 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC112220.1-201ENST00000434628 355 ntBASIC3.19□□□□□ -1.9
TOP1P11387 RPL21P2-201ENST00000440049 481 ntBASIC3.19□□□□□ -1.9
TOP1P11387 COX6CP2-201ENST00000444980 225 ntBASIC3.19□□□□□ -1.9
TOP1P11387 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.19□□□□□ -1.9
TOP1P11387 AL589880.1-201ENST00000448271 287 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC108938.1-201ENST00000451204 136 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AL359385.1-201ENST00000456509 365 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC119751.4-201ENST00000507498 357 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC112518.2-201ENST00000508565 425 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.19□□□□□ -1.9
TOP1P11387 RNU6-27P-201ENST00000516146 107 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.19□□□□□ -1.9
TOP1P11387 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.19□□□□□ -1.9
TOP1P11387 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.19□□□□□ -1.9
TOP1P11387 HMGB1P6-201ENST00000569046 646 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC010653.1-201ENST00000571108 881 ntBASIC3.19□□□□□ -1.9
TOP1P11387 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.19□□□□□ -1.9
TOP1P11387 AC090330.1-201ENST00000588646 764 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC006023.1-201ENST00000603944 259 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AL035413.2-201ENST00000604801 525 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC008277.2-201ENST00000605196 797 ntBASIC3.19□□□□□ -1.9
TOP1P11387 OR2AS2P-201ENST00000606902 342 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC008759.3-201ENST00000613300 508 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC018926.1-201ENST00000616335 435 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC231759.1-201ENST00000616455 597 ntBASIC3.19□□□□□ -1.9
TOP1P11387 MIR6852-201ENST00000621699 66 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AP003485.2-201ENST00000623636 610 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC093875.1-201ENST00000623688 504 ntBASIC3.19□□□□□ -1.9
TOP1P11387 AC091925.2-201ENST00000625059 256 ntBASIC3.19□□□□□ -1.9
TOP1P11387 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.19□□□□□ -1.9
TOP1P11387 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TOP1P11387 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TOP1P11387 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.19□□□□□ -1.9
TOP1P11387 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
TOP1P11387 AC092447.7-201ENST00000422212 1621 ntBASIC3.19□□□□□ -1.9
TOP1P11387 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TOP1P11387 GDI2P1-201ENST00000429312 1336 ntBASIC3.19□□□□□ -1.9
TOP1P11387 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TOP1P11387 RNU6-251P-201ENST00000363235 104 ntBASIC3.18□□□□□ -1.9
TOP1P11387 RNU6-207P-201ENST00000384137 107 ntBASIC3.18□□□□□ -1.9
TOP1P11387 SNORA51.6-201ENST00000384151 125 ntBASIC3.18□□□□□ -1.9
TOP1P11387 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TOP1P11387 RNU2-52P-201ENST00000410680 190 ntBASIC3.18□□□□□ -1.9
TOP1P11387 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.18□□□□□ -1.9
TOP1P11387 HMGN2P30-201ENST00000423237 256 ntBASIC3.18□□□□□ -1.9
TOP1P11387 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.18□□□□□ -1.9
TOP1P11387 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.18□□□□□ -1.9
TOP1P11387 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.18□□□□□ -1.9
TOP1P11387 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.18□□□□□ -1.9
TOP1P11387 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TOP1P11387 AC090525.1-201ENST00000479116 478 ntBASIC3.18□□□□□ -1.9
TOP1P11387 RPL9P33-201ENST00000484311 566 ntBASIC3.18□□□□□ -1.9
TOP1P11387 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.18□□□□□ -1.9
TOP1P11387 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.18□□□□□ -1.9
TOP1P11387 AC006390.1-201ENST00000508068 283 ntBASIC3.18□□□□□ -1.9
TOP1P11387 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.18□□□□□ -1.9
TOP1P11387 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.18□□□□□ -1.9
TOP1P11387 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.18□□□□□ -1.9
TOP1P11387 AC011611.5-201ENST00000552477 578 ntBASIC3.18□□□□□ -1.9
TOP1P11387 NBEAP1-201ENST00000554452 979 ntBASIC3.18□□□□□ -1.9
TOP1P11387 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TOP1P11387 RN7SL622P-201ENST00000585292 275 ntBASIC3.18□□□□□ -1.9
TOP1P11387 AL627309.6-201ENST00000606857 840 ntBASIC3.18□□□□□ -1.9
TOP1P11387 AC099654.7-201ENST00000635788 2127 ntBASIC3.18□□□□□ -1.9
TOP1P11387 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.18□□□□□ -1.9
TOP1P11387 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TOP1P11387 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TOP1P11387 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TOP1P11387 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TOP1P11387 SNORD51-201ENST00000384320 80 ntBASIC3.17□□□□□ -1.9
TOP1P11387 MIR122-201ENST00000385044 85 ntBASIC3.17□□□□□ -1.9
TOP1P11387 RNU6-1000P-201ENST00000391066 106 ntBASIC3.17□□□□□ -1.9
TOP1P11387 MTCO2P31-201ENST00000402702 684 ntBASIC3.17□□□□□ -1.9
TOP1P11387 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.17□□□□□ -1.9
TOP1P11387 RPL27AP8-201ENST00000424277 446 ntBASIC3.17□□□□□ -1.9
TOP1P11387 SAR1AP4-201ENST00000429225 591 ntBASIC3.17□□□□□ -1.9
TOP1P11387 AC005345.1-201ENST00000431868 217 ntBASIC3.17□□□□□ -1.9
TOP1P11387 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.17□□□□□ -1.9
TOP1P11387 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.17□□□□□ -1.9
TOP1P11387 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.17□□□□□ -1.9
TOP1P11387 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.17□□□□□ -1.9
TOP1P11387 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.17□□□□□ -1.9
TOP1P11387 AL109933.2-201ENST00000452651 260 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms