Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-877P-201ENST00000383868 107 ntBASIC4.21□□□□□ -1.74
RHOP08100 MIR30B-201ENST00000384850 88 ntBASIC4.21□□□□□ -1.74
RHOP08100 MIR449B-201ENST00000384995 97 ntBASIC4.21□□□□□ -1.74
RHOP08100 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.21□□□□□ -1.74
RHOP08100 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.21□□□□□ -1.74
RHOP08100 RAB9AP3-201ENST00000412737 573 ntBASIC4.21□□□□□ -1.74
RHOP08100 SNRPEP10-201ENST00000420249 274 ntBASIC4.21□□□□□ -1.74
RHOP08100 AL353193.1-201ENST00000421444 268 ntBASIC4.21□□□□□ -1.74
RHOP08100 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.21□□□□□ -1.74
RHOP08100 RPL23AP89-201ENST00000439324 255 ntBASIC4.21□□□□□ -1.74
RHOP08100 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.21□□□□□ -1.74
RHOP08100 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.21□□□□□ -1.74
RHOP08100 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.21□□□□□ -1.74
RHOP08100 RAB9AP1-201ENST00000449393 573 ntBASIC4.21□□□□□ -1.74
RHOP08100 AP001992.1-205ENST00000462248 379 ntBASIC4.21□□□□□ -1.74
RHOP08100 RPL5P30-201ENST00000465511 891 ntBASIC4.21□□□□□ -1.74
RHOP08100 RPS20P21-201ENST00000466859 343 ntBASIC4.21□□□□□ -1.74
RHOP08100 AC079382.1-201ENST00000493346 557 ntBASIC4.21□□□□□ -1.74
RHOP08100 AC021146.3-201ENST00000511911 260 ntBASIC4.21□□□□□ -1.74
RHOP08100 AC046134.1-201ENST00000514454 666 ntBASIC4.21□□□□□ -1.74
RHOP08100 RNU7-143P-201ENST00000516781 65 ntBASIC4.21□□□□□ -1.74
RHOP08100 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.21□□□□□ -1.74
RHOP08100 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.21□□□□□ -1.74
RHOP08100 AC091516.1-201ENST00000549191 703 ntBASIC4.21□□□□□ -1.74
RHOP08100 SUB1P2-201ENST00000556401 297 ntBASIC4.21□□□□□ -1.74
RHOP08100 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.21□□□□□ -1.74
RHOP08100 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.21□□□□□ -1.74
RHOP08100 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.21□□□□□ -1.74
RHOP08100 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.21□□□□□ -1.74
RHOP08100 BNIP3P9-201ENST00000603714 553 ntBASIC4.21□□□□□ -1.74
RHOP08100 AL355472.4-201ENST00000610233 626 ntBASIC4.21□□□□□ -1.74
RHOP08100 FP236240.3-201ENST00000623061 327 ntBASIC4.21□□□□□ -1.74
RHOP08100 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RHOP08100 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RHOP08100 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.74
RHOP08100 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RHOP08100 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RHOP08100 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
RHOP08100 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RHOP08100 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RHOP08100 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RHOP08100 RNU6-1322P-201ENST00000364309 107 ntBASIC4.2□□□□□ -1.74
RHOP08100 SNORA70.4-201ENST00000365509 134 ntBASIC4.2□□□□□ -1.74
RHOP08100 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RHOP08100 RNU6-1207P-201ENST00000384343 107 ntBASIC4.2□□□□□ -1.74
RHOP08100 RNA5SP372-201ENST00000390836 115 ntBASIC4.2□□□□□ -1.74
RHOP08100 AL121834.1-202ENST00000404494 277 ntBASIC4.2□□□□□ -1.74
RHOP08100 RNU6-908P-201ENST00000410160 94 ntBASIC4.2□□□□□ -1.74
RHOP08100 RN7SKP156-201ENST00000410308 342 ntBASIC4.2□□□□□ -1.74
RHOP08100 ZNF90P2-204ENST00000419323 1075 ntBASIC4.2□□□□□ -1.74
RHOP08100 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.2□□□□□ -1.74
RHOP08100 AL035410.1-201ENST00000427409 427 ntBASIC4.2□□□□□ -1.74
RHOP08100 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.2□□□□□ -1.74
RHOP08100 PSMA6P3-201ENST00000428242 164 ntBASIC4.2□□□□□ -1.74
RHOP08100 OR4F13P-201ENST00000428478 931 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC008065.1-201ENST00000428525 348 ntBASIC4.2□□□□□ -1.74
RHOP08100 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.2□□□□□ -1.74
RHOP08100 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.2□□□□□ -1.74
RHOP08100 USP9YP8-201ENST00000441913 500 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.2□□□□□ -1.74
RHOP08100 snoU13.8-201ENST00000458890 104 ntBASIC4.2□□□□□ -1.74
RHOP08100 RPL36AP51-201ENST00000487216 318 ntBASIC4.2□□□□□ -1.74
RHOP08100 RN7SL323P-201ENST00000494712 295 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC010587.1-201ENST00000505809 469 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.2□□□□□ -1.74
RHOP08100 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.2□□□□□ -1.74
RHOP08100 RNU6-1281P-201ENST00000516223 105 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC107934.1-201ENST00000522215 217 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC104383.1-201ENST00000530297 370 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.2□□□□□ -1.74
RHOP08100 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RHOP08100 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.2□□□□□ -1.74
RHOP08100 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.2□□□□□ -1.74
RHOP08100 CBX3P5-201ENST00000552017 521 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.2□□□□□ -1.74
RHOP08100 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.2□□□□□ -1.74
RHOP08100 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RHOP08100 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.2□□□□□ -1.74
RHOP08100 MIR3167-201ENST00000579623 85 ntBASIC4.2□□□□□ -1.74
RHOP08100 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.2□□□□□ -1.74
RHOP08100 UBE2L4-201ENST00000587688 464 ntBASIC4.2□□□□□ -1.74
RHOP08100 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.2□□□□□ -1.74
RHOP08100 AL162413.1-201ENST00000603198 110 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC007621.1-201ENST00000604544 437 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.2□□□□□ -1.74
RHOP08100 AC009994.1-201ENST00000606889 253 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC093788.1-201ENST00000609356 927 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC104260.1-201ENST00000616660 539 ntBASIC4.2□□□□□ -1.74
RHOP08100 AC012150.2-201ENST00000621300 544 ntBASIC4.2□□□□□ -1.74
RHOP08100 AL158801.5-201ENST00000623123 465 ntBASIC4.2□□□□□ -1.74
RHOP08100 FER-210ENST00000628534 558 ntTSL 5 BASIC4.2□□□□□ -1.74
RHOP08100 MIR6715B-201ENST00000637172 77 ntBASIC4.2□□□□□ -1.74
RHOP08100 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RHOP08100 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RHOP08100 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
RHOP08100 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.2□□□□□ -1.74
RHOP08100 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RHOP08100 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RHOP08100 AC106871.1-201ENST00000568324 3102 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms