Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR5583-1-201ENST00000580941 59 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCD1O75127 AL592436.1-201ENST00000605135 558 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCD1O75127 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.46
PTCD1O75127 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
PTCD1O75127 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCD1O75127 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCD1O75127 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PTCD1O75127 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCD1O75127 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCD1O75127 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCD1O75127 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCD1O75127 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCD1O75127 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PTCD1O75127 ZNF734P-201ENST00000419494 1534 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 Y_RNA.307-201ENST00000365022 117 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 RNY4P36-201ENST00000391116 96 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 MTCYBP4-201ENST00000401524 249 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCD1O75127 TMSB10P2-201ENST00000416049 131 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 AC114491.1-201ENST00000416095 246 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 AC007529.1-201ENST00000418574 2178 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCD1O75127 AL031584.1-201ENST00000447169 754 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 AC079804.1-201ENST00000461922 436 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCD1O75127 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.95□□□□□ -1.46
PTCD1O75127 AC005798.1-201ENST00000513715 387 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 RPL23AP53-201ENST00000521854 457 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 AC023442.1-201ENST00000531247 422 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCD1O75127 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.95□□□□□ -1.46
PTCD1O75127 AC006349.1-201ENST00000555526 235 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 AC007938.3-201ENST00000604965 623 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 AC005014.2-201ENST00000607795 599 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 BX005214.3-202ENST00000619809 325 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 AL161637.1-201ENST00000622380 412 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 AC025034.2-201ENST00000623264 286 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.95□□□□□ -1.46
PTCD1O75127 AL445437.1-201ENST00000623157 3087 ntBASIC5.95□□□□□ -1.46
PTCD1O75127 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PTCD1O75127 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
PTCD1O75127 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.94□□□□□ -1.46
PTCD1O75127 RNU6-249P-201ENST00000363016 102 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 RN7SKP44-201ENST00000363602 316 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 RNA5SP28-201ENST00000363841 119 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 U3.12-201ENST00000364498 214 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 SNORD51-201ENST00000384320 80 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 SNORA37-201ENST00000384504 129 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 SNORA57.1-201ENST00000391227 145 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 RN7SKP159-201ENST00000410657 292 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCD1O75127 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTCD1O75127 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCD1O75127 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCD1O75127 RPS3AP52-201ENST00000435639 297 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 MRPS21P3-201ENST00000436696 262 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 BX276092.4-201ENST00000452056 248 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 RPL36AP13-201ENST00000457490 317 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 ZFRP1-201ENST00000457579 2970 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 RNU7-66P-201ENST00000459469 62 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 AC004801.2-202ENST00000463559 283 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCD1O75127 AC107222.1-201ENST00000510899 637 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.94□□□□□ -1.46
PTCD1O75127 SNORA31.9-201ENST00000516429 84 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 RNU6-1088P-201ENST00000516850 104 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCD1O75127 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCD1O75127 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.94□□□□□ -1.46
PTCD1O75127 AP000654.2-201ENST00000605633 586 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 AC006329.2-201ENST00000611491 394 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 AL445567.2-201ENST00000618935 498 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 uc_338.11-201ENST00000619132 160 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 uc_338.22-201ENST00000622722 187 ntBASIC5.94□□□□□ -1.46
PTCD1O75127 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCD1O75127 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCD1O75127 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCD1O75127 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCD1O75127 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCD1O75127 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCD1O75127 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCD1O75127 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTCD1O75127 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCD1O75127 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTCD1O75127 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCD1O75127 BDP1P-201ENST00000582658 1990 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTCD1O75127 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PTCD1O75127 RNU6-1287P-201ENST00000362914 107 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 RNU5E-6P-201ENST00000365574 115 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PTCD1O75127 SNORA5.1-201ENST00000384275 131 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 SNORA24.1-201ENST00000384401 135 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 RNU6-1060P-201ENST00000384664 107 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 RNU11-4P-201ENST00000391149 133 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 MIR548I3-201ENST00000408378 149 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 MIR548I1-201ENST00000408810 149 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms