Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC090751.1-201ENST00000566966 267 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC090616.5-202ENST00000582111 297 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.87□□□□□ -1.79
SMAD6O43541 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.87□□□□□ -1.79
SMAD6O43541 PRELID3BP8-201ENST00000604148 295 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC008536.2-201ENST00000607284 349 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC103710.1-201ENST00000610003 901 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.87□□□□□ -1.79
SMAD6O43541 AC006133.1-201ENST00000617106 264 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC108479.2-201ENST00000617314 601 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 CR392039.5-201ENST00000623201 510 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC012442.3-202ENST00000636742 206 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC092326.2-201ENST00000624772 1561 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 RPS4XP5-202ENST00000449995 1334 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMAD6O43541 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
SMAD6O43541 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SMAD6O43541 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.86□□□□□ -1.79
SMAD6O43541 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
SMAD6O43541 Y_RNA.402-201ENST00000383972 102 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SMAD6O43541 SNORA48.7-201ENST00000391302 135 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 HSPE1P26-201ENST00000405341 275 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 GSTA9P-201ENST00000406231 611 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 RPS3AP3-201ENST00000411933 242 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 RAB9AP3-201ENST00000412737 573 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 NUP35P2-201ENST00000416748 943 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC083875.1-201ENST00000419509 405 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.86□□□□□ -1.79
SMAD6O43541 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.86□□□□□ -1.79
SMAD6O43541 MTCO2P11-201ENST00000431069 680 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 GOT2P5-201ENST00000433995 546 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 CKS1BP5-201ENST00000434172 273 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.86□□□□□ -1.79
SMAD6O43541 RAB9AP1-201ENST00000449393 573 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.86□□□□□ -1.79
SMAD6O43541 MTND1P11-201ENST00000456661 876 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 NF1P3-201ENST00000457709 450 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 ACTR3P3-201ENST00000480448 893 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
SMAD6O43541 UBE2CP3-201ENST00000502715 450 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC009646.1-201ENST00000510455 318 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.86□□□□□ -1.79
SMAD6O43541 RNA5SP208-201ENST00000516156 78 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 TRMT10BP1-201ENST00000519377 943 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC027309.2-201ENST00000520566 192 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.86□□□□□ -1.79
SMAD6O43541 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.86□□□□□ -1.79
SMAD6O43541 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.86□□□□□ -1.79
SMAD6O43541 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.86□□□□□ -1.79
SMAD6O43541 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.86□□□□□ -1.79
SMAD6O43541 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.86□□□□□ -1.79
SMAD6O43541 AC090877.1-201ENST00000561418 344 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.86□□□□□ -1.79
SMAD6O43541 AC093519.1-201ENST00000566109 298 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.86□□□□□ -1.79
SMAD6O43541 AC010928.3-201ENST00000587712 541 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC112191.3-201ENST00000604371 277 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC245389.1-201ENST00000605141 529 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 HMGB1P50-201ENST00000605814 607 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.86□□□□□ -1.79
SMAD6O43541 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC010133.1-201ENST00000615809 842 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC104010.1-201ENST00000616889 150 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC034229.5-201ENST00000624258 185 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC009033.1-201ENST00000624279 431 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC231657.1-201ENST00000624313 397 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 AC068880.5-201ENST00000624331 290 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.86□□□□□ -1.79
SMAD6O43541 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMAD6O43541 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SMAD6O43541 AC024560.2-201ENST00000507981 1497 ntBASIC3.86□□□□□ -1.79
SMAD6O43541 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMAD6O43541 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SMAD6O43541 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.85□□□□□ -1.79
SMAD6O43541 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SMAD6O43541 SNORD3H-201ENST00000384486 214 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 PTMAP5-201ENST00000393073 333 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 RPL7P60-201ENST00000397636 735 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.85□□□□□ -1.79
SMAD6O43541 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.85□□□□□ -1.79
SMAD6O43541 AL159169.1-201ENST00000421119 127 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 PSMA2P3-201ENST00000429685 675 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AC018644.1-201ENST00000429934 551 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 ZYG11AP1-201ENST00000430329 837 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AL358934.1-201ENST00000432346 324 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 MTCYBP45-201ENST00000435243 565 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.85□□□□□ -1.79
SMAD6O43541 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.85□□□□□ -1.79
SMAD6O43541 AL133162.1-201ENST00000463228 453 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms