Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC021678.1-201ENST00000505195 936 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC112198.1-201ENST00000505369 1220 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 MIR5680-201ENST00000577577 84 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AF131215.7-201ENST00000602443 707 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC004987.4-201ENST00000603383 338 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 DUXAP11-201ENST00000603858 526 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC004853.1-201ENST00000604902 698 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC009570.1-201ENST00000609599 745 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 MIR8057-201ENST00000620957 69 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC127502.3-201ENST00000636170 1206 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 CUL1P1-201ENST00000509510 2425 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 GNG5P1-201ENST00000255500 204 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 RPL23AP57-201ENST00000332361 466 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 RNU6-83P-201ENST00000384568 112 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 MIR128-1-201ENST00000384921 82 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 HMGN1P24-201ENST00000412282 298 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 SSXP9-201ENST00000417503 292 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 RPL27AP8-201ENST00000424277 446 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 RPL23AP82-202ENST00000427528 469 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 RAC1P7-201ENST00000445367 377 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC115115.1-201ENST00000449927 248 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 RNA5SP310-201ENST00000459084 116 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 RPL31P50-201ENST00000471002 296 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 RPS29P2-201ENST00000479278 136 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC068724.1-201ENST00000487100 792 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC104090.1-201ENST00000506341 1171 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC093281.2-201ENST00000510153 597 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 TXNP6-201ENST00000510190 310 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC110760.3-202ENST00000515177 371 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 SNORD59.2-201ENST00000516873 68 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 RNA5SP380-201ENST00000517190 98 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AP001372.4-201ENST00000524889 472 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC015917.1-201ENST00000579654 510 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC067852.3-201ENST00000589177 561 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 BBIP1P1-201ENST00000602999 279 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC105148.1-201ENST00000604961 409 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 YPEL5P2-201ENST00000605553 359 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AP002826.1-201ENST00000608835 315 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AL596245.1-201ENST00000618994 362 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 AC006111.3-201ENST00000622137 383 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NPIPA2E9PIF3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.03□□□□□ -1.93
NPIPA2E9PIF3 AC103988.1-201ENST00000566382 2177 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 AL365361.1-201ENST00000566942 3481 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 RNU6-343P-201ENST00000364709 104 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 MIR135A2-201ENST00000384854 100 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 FAT1P1-201ENST00000406588 507 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 AL356968.1-201ENST00000416622 474 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 AC006960.1-201ENST00000419980 153 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 AL953862.1-201ENST00000423016 168 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 USP9YP36-201ENST00000424581 829 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 MTATP6P4-201ENST00000427725 675 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 AL512649.1-201ENST00000428997 581 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 ZYG11AP1-201ENST00000430329 837 ntBASIC3.02□□□□□ -1.93
NPIPA2E9PIF3 EEF1E1P1-201ENST00000446998 430 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms