Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 RNU6-7-201ENST00000364784 107 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 RNU6-8-201ENST00000365467 107 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 SNORA80E-201ENST00000384744 137 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 U3.37-201ENST00000408528 213 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AL445183.3-201ENST00000414168 502 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 USP9YP27-201ENST00000418455 438 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AL137014.1-201ENST00000420490 1226 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AL645937.1-202ENST00000421799 937 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 COTL1P1-201ENST00000422309 375 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 MTCO1P39-201ENST00000426148 480 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 MTND4LP10-201ENST00000435146 291 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AL831737.1-201ENST00000441288 271 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 MTCO3P2-201ENST00000457365 171 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 RPL37P25-201ENST00000507308 276 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AC109471.1-201ENST00000511631 612 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AC010374.2-201ENST00000512933 535 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 RNU6-27P-201ENST00000516146 107 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 RNU1-103P-201ENST00000516502 125 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 OR4R1P-201ENST00000529879 463 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AC087241.2-201ENST00000535801 324 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 CYCSP39-201ENST00000565821 309 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 LARP7P3-201ENST00000579888 337 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AL645944.1-201ENST00000603857 493 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 KATNBL1P5-201ENST00000605015 517 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AC093732.2-201ENST00000607950 274 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 AC011890.2-201ENST00000613393 294 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 ZNF663P-202ENST00000641770 1131 ntBASIC2.52□□□□□ -2.01
USH1CQ9Y6N9 SGO1P1-201ENST00000603525 1447 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AC008432.1-201ENST00000615912 1320 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 RNU6-173P-201ENST00000364215 104 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 MIR16-1-201ENST00000385271 89 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 U3.29-201ENST00000391296 212 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AL590762.3-201ENST00000436372 640 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 LSM1P1-201ENST00000438629 273 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 OR6K5P-201ENST00000447050 945 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AL589880.1-201ENST00000448271 287 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AL359385.1-201ENST00000456509 365 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 HIGD1AP13-201ENST00000509878 289 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 HMGB1P1-201ENST00000522557 636 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 AP006248.3-201ENST00000623580 594 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 CRYM-AS1-204ENST00000637983 556 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 MFSD8-245ENST00000641743 948 ntBASIC2.51□□□□□ -2.01
USH1CQ9Y6N9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC099654.7-201ENST00000635788 2127 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 RNU6-115P-201ENST00000364310 107 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AL356057.3-201ENST00000402607 340 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 RNU2-25P-201ENST00000411041 191 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AL133384.1-201ENST00000412744 351 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AF274854.1-201ENST00000413236 615 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC080125.1-201ENST00000414888 684 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AL513477.1-202ENST00000417061 214 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 RPL35AP12-201ENST00000425362 338 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AP001486.1-201ENST00000463339 476 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AL049873.1-201ENST00000480540 376 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 RPL21P47-201ENST00000483696 477 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 VN1R104P-201ENST00000505115 1009 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC006390.1-201ENST00000508068 283 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC107222.1-201ENST00000510899 637 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC113192.3-201ENST00000529152 742 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC010738.1-201ENST00000604970 987 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 AC091925.2-201ENST00000625059 256 ntBASIC2.5□□□□□ -2.01
USH1CQ9Y6N9 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AL513185.3-201ENST00000433335 1300 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms