Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 ZNF519P3-201ENST00000557158 1032 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC012414.6-201ENST00000568241 401 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RPL23AP84-201ENST00000571193 464 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC011468.4-201ENST00000603942 409 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC112191.3-201ENST00000604371 277 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AL592436.1-201ENST00000605135 558 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC121334.2-201ENST00000605387 271 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC093838.1-201ENST00000613014 469 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC091905.1-201ENST00000624400 311 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC019226.1-201ENST00000625666 515 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC021755.1-201ENST00000559747 1447 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AL109755.1-201ENST00000401791 649 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 RPS7P13-201ENST00000413955 498 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 RPL7L1P10-201ENST00000427790 463 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC017083.1-201ENST00000428093 483 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AL356867.1-201ENST00000429623 299 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 RPL26P6-201ENST00000440913 438 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AL162389.1-201ENST00000449233 177 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 MTCO3P20-201ENST00000454926 688 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 RNU7-59P-201ENST00000459101 61 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 RPL7P15-201ENST00000461190 712 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 UBE2CP3-201ENST00000502715 450 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 MTND4P2-201ENST00000507767 1203 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 CBX3P3-201ENST00000508108 532 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 RNU6-201P-201ENST00000517100 61 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 RNU6-840P-201ENST00000517275 65 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 NARSP2-201ENST00000518524 679 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 RPL12P22-201ENST00000519073 490 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC008489.1-201ENST00000524271 483 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 OR4T1P-201ENST00000554933 911 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC006116.10-201ENST00000591836 581 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC020914.4-201ENST00000597690 277 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC119751.7-201ENST00000600494 245 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC090970.3-201ENST00000612566 866 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AL110115.1-201ENST00000614396 364 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC008250.2-201ENST00000615261 205 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC108479.2-201ENST00000617314 601 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AC090582.1-201ENST00000636321 199 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 AL138713.1-201ENST00000624026 2130 ntBASIC3.68□□□□□ -1.82
BRF2Q9HAW0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRF2Q9HAW0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AF117829.1-206ENST00000621883 3802 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AL136164.4-201ENST00000625013 2135 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 RNU5E-8P-201ENST00000363502 116 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 SNORA62-201ENST00000365493 153 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 RNU6-278P-201ENST00000390945 109 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 PPIAP31-201ENST00000405422 495 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 Y_RNA.608-201ENST00000410647 95 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AL590383.1-201ENST00000428602 75 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 TAF9P1-201ENST00000445421 515 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 ST13P20-201ENST00000447996 1065 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms