Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MIR135A2-201ENST00000384854 100 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 MIR181B1-201ENST00000385240 110 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 RNU6-1176P-201ENST00000390955 107 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 MTND4P3-201ENST00000417829 541 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 AC007435.1-201ENST00000421086 415 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 RPL7P44-201ENST00000424827 742 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS2Q99743 SNORA59A-201ENST00000459326 152 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 AC104164.3-201ENST00000467363 1258 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 RN7SL633P-201ENST00000488974 297 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 RPL7P23-201ENST00000493874 747 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 AC090453.1-201ENST00000495560 436 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NPAS2Q99743 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.95□□□□□ -1.94
NPAS2Q99743 RNA5SP341-201ENST00000516261 117 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS2Q99743 DEFB108D-201ENST00000527787 222 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.95□□□□□ -1.94
NPAS2Q99743 DNAJC8P1-201ENST00000554535 372 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.95□□□□□ -1.94
NPAS2Q99743 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.95□□□□□ -1.94
NPAS2Q99743 MIR3912-201ENST00000577566 105 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 UBL5P2-201ENST00000583788 219 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS2Q99743 PRELID3BP8-201ENST00000604148 295 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 AC103798.2-201ENST00000624292 632 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 AC126544.2-201ENST00000625174 749 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS2Q99743 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPAS2Q99743 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPAS2Q99743 GABRG2-229ENST00000641017 3628 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 AC092435.3-201ENST00000565538 3654 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 OR1S2-201ENST00000302592 978 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 RNU6-799P-201ENST00000363567 107 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 SNORA7.4-201ENST00000384249 137 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 Y_RNA.578-201ENST00000390903 88 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AL355143.1-201ENST00000407101 841 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 MIR1290-201ENST00000408735 78 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 RN7SKP123-201ENST00000410732 291 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AC096664.2-201ENST00000411843 406 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AC007742.1-201ENST00000425789 329 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AL590233.1-201ENST00000430017 456 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.94□□□□□ -1.94
NPAS2Q99743 ELOCP26-201ENST00000436067 329 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.94□□□□□ -1.94
NPAS2Q99743 AL353691.1-201ENST00000451332 387 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 ELOCP23-201ENST00000452014 332 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 S100A11P2-201ENST00000467589 312 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPAS2Q99743 SETP11-201ENST00000473027 690 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 VN1R104P-201ENST00000505115 1009 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AC011260.1-201ENST00000578420 472 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.94□□□□□ -1.94
NPAS2Q99743 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.94□□□□□ -1.94
NPAS2Q99743 DUXAP11-201ENST00000603858 526 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 BNIP3P31-201ENST00000604515 566 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AC106791.2-201ENST00000604680 391 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AP000254.1-201ENST00000609934 520 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 RNU6-1192P-201ENST00000612197 107 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AC025588.4-201ENST00000615802 908 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 RNU6-489P-201ENST00000618289 107 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 AC073348.1-201ENST00000623002 331 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.94□□□□□ -1.94
NPAS2Q99743 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.94□□□□□ -1.94
NPAS2Q99743 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPAS2Q99743 CDR1-202ENST00000625883 1485 ntBASIC2.94□□□□□ -1.94
NPAS2Q99743 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPAS2Q99743 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
NPAS2Q99743 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NPAS2Q99743 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.93□□□□□ -1.94
NPAS2Q99743 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NPAS2Q99743 AP002907.1-201ENST00000606361 1430 ntBASIC2.93□□□□□ -1.94
NPAS2Q99743 AC008568.2-201ENST00000623862 2313 ntBASIC2.93□□□□□ -1.94
NPAS2Q99743 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NPAS2Q99743 AC091564.4-201ENST00000533934 2194 ntBASIC2.93□□□□□ -1.94
NPAS2Q99743 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NPAS2Q99743 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NPAS2Q99743 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NPAS2Q99743 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.93□□□□□ -1.94
NPAS2Q99743 AC096533.1-201ENST00000411645 353 ntBASIC2.93□□□□□ -1.94
NPAS2Q99743 AL592310.1-201ENST00000414330 671 ntBASIC2.93□□□□□ -1.94
NPAS2Q99743 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.93□□□□□ -1.94
NPAS2Q99743 MTATP6P27-201ENST00000416987 621 ntBASIC2.93□□□□□ -1.94
NPAS2Q99743 AC234781.2-201ENST00000426370 994 ntBASIC2.93□□□□□ -1.94
NPAS2Q99743 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.93□□□□□ -1.94
NPAS2Q99743 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.93□□□□□ -1.94
NPAS2Q99743 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.93□□□□□ -1.94
NPAS2Q99743 AC024082.2-201ENST00000434771 238 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms