Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.75□□□□□ -2.13
TTC28Q96AY4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.75□□□□□ -2.13
TTC28Q96AY4 MTATP6P3-201ENST00000581686 676 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 AC078899.5-201ENST00000612475 178 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 AC008133.2-201ENST00000624540 351 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.74□□□□□ -2.13
TTC28Q96AY4 Y_RNA.303-201ENST00000364998 94 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 MTCO3P30-201ENST00000426425 670 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 AC008127.2-201ENST00000549925 1075 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
TTC28Q96AY4 AC090229.1-201ENST00000590983 1609 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.74□□□□□ -2.13
TTC28Q96AY4 HSPD1P16-201ENST00000402302 394 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.74□□□□□ -2.13
TTC28Q96AY4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.74□□□□□ -2.13
TTC28Q96AY4 CALM1P1-201ENST00000442082 433 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.74□□□□□ -2.13
TTC28Q96AY4 CYP3A137P-201ENST00000562436 69 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 MIR7153-201ENST00000637758 57 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 MKKS-204ENST00000639674 192 ntBASIC1.74□□□□□ -2.13
TTC28Q96AY4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TTC28Q96AY4 TOMM22P1-201ENST00000418578 312 ntBASIC1.73□□□□□ -2.13
TTC28Q96AY4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.73□□□□□ -2.13
TTC28Q96AY4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.73□□□□□ -2.13
TTC28Q96AY4 RNU6-1231P-201ENST00000517185 103 ntBASIC1.73□□□□□ -2.13
TTC28Q96AY4 MIR5002-201ENST00000584713 97 ntBASIC1.73□□□□□ -2.13
TTC28Q96AY4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TTC28Q96AY4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.73□□□□□ -2.13
TTC28Q96AY4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.73□□□□□ -2.13
TTC28Q96AY4 AC007560.1-201ENST00000426912 237 ntBASIC1.73□□□□□ -2.13
TTC28Q96AY4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.73□□□□□ -2.13
TTC28Q96AY4 AP002345.1-201ENST00000456493 928 ntBASIC1.73□□□□□ -2.13
TTC28Q96AY4 AC135999.1-201ENST00000478962 479 ntBASIC1.73□□□□□ -2.13
TTC28Q96AY4 AC022790.1-201ENST00000522872 204 ntBASIC1.73□□□□□ -2.13
TTC28Q96AY4 AC015720.1-201ENST00000565251 277 ntBASIC1.73□□□□□ -2.13
TTC28Q96AY4 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
TTC28Q96AY4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TTC28Q96AY4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TTC28Q96AY4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC104581.2-201ENST00000572227 430 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC080078.3-201ENST00000605407 463 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC025016.1-201ENST00000616746 682 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 AL450326.2-201ENST00000421913 1962 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TTC28Q96AY4 RNA5SP257-201ENST00000363023 116 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 RPL31P2-201ENST00000413849 377 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
TTC28Q96AY4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.72□□□□□ -2.13
TTC28Q96AY4 RNA5SP395-201ENST00000516567 118 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC092851.1-201ENST00000535964 478 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC009314.1-201ENST00000603871 304 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC096772.1-201ENST00000609146 564 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC013562.2-201ENST00000611632 603 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.72□□□□□ -2.13
TTC28Q96AY4 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.72□□□□□ -2.13
TTC28Q96AY4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TTC28Q96AY4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TTC28Q96AY4 MIR520E-201ENST00000384867 87 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 PTP4A1P1-201ENST00000420539 515 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AC023128.2-201ENST00000420880 1223 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 RMST_6.1-201ENST00000611980 203 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AP001005.3-201ENST00000622049 129 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AC022513.1-201ENST00000624512 117 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AC010680.1-201ENST00000590024 3590 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 NUP58P1-201ENST00000502546 1738 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 MTND4P1-201ENST00000457501 1466 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 USP9YP27-201ENST00000418455 438 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.71□□□□□ -2.14
TTC28Q96AY4 RPL21P2-201ENST00000440049 481 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.71□□□□□ -2.14
TTC28Q96AY4 DUXAP8-207ENST00000456786 622 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 RPL9P33-201ENST00000484311 566 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.71□□□□□ -2.14
TTC28Q96AY4 CBX3P5-201ENST00000552017 521 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AP000787.2-201ENST00000604432 568 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AC243773.3-201ENST00000613270 256 ntBASIC1.71□□□□□ -2.14
TTC28Q96AY4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.71□□□□□ -2.14
TTC28Q96AY4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
TTC28Q96AY4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TTC28Q96AY4 AP001148.1-201ENST00000624124 2359 ntBASIC1.7□□□□□ -2.14
TTC28Q96AY4 MIR517C-201ENST00000385103 95 ntBASIC1.7□□□□□ -2.14
TTC28Q96AY4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.7□□□□□ -2.14
TTC28Q96AY4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.7□□□□□ -2.14
TTC28Q96AY4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.7□□□□□ -2.14
TTC28Q96AY4 RPPH1-2P-201ENST00000516688 293 ntBASIC1.7□□□□□ -2.14
TTC28Q96AY4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.7□□□□□ -2.14
TTC28Q96AY4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.7□□□□□ -2.14
TTC28Q96AY4 VN1R7P-201ENST00000619242 903 ntBASIC1.7□□□□□ -2.14
TTC28Q96AY4 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.7□□□□□ -2.14
TTC28Q96AY4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.7□□□□□ -2.14
TTC28Q96AY4 DDX43P2-201ENST00000604753 1354 ntBASIC1.7□□□□□ -2.14
TTC28Q96AY4 MIR3074-201ENST00000384885 81 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 MIR216A-201ENST00000385063 110 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 RN7SKP123-201ENST00000410732 291 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 XKRYP4-201ENST00000414395 483 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms