Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL160394.1-201ENST00000624765 724 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 HNRNPDP2-201ENST00000406475 478 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 RNA5SP344-201ENST00000411081 104 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC234064.1-201ENST00000436312 247 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC092170.1-201ENST00000440211 356 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 RPL30P9-201ENST00000465586 330 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 RPL36AP51-201ENST00000487216 318 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 RN7SKP24-201ENST00000515888 284 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC083923.1-201ENST00000523708 376 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AP003717.3-201ENST00000544832 1180 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC095057.3-201ENST00000567102 1157 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC120053.1-201ENST00000607706 736 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC046143.2-201ENST00000609789 160 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC078880.5-201ENST00000617845 421 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AL603865.2-201ENST00000401679 213 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 RN7SKP32-201ENST00000410167 303 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 TAF13P2-201ENST00000416876 286 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC092634.2-201ENST00000428146 1010 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AL031663.1-201ENST00000437445 219 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 RPL23AP42-201ENST00000471152 471 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 GNAI2P1-201ENST00000541815 315 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 NIFKP8-201ENST00000560500 874 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC105137.2-201ENST00000569073 466 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 MIR4498-201ENST00000577599 66 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 MIR4781-201ENST00000585250 76 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC069304.3-201ENST00000603938 1084 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AL158050.2-201ENST00000605336 568 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC021851.1-201ENST00000608537 1082 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC009318.2-201ENST00000610917 651 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC099654.8-201ENST00000637757 681 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 AF127577.6-201ENST00000623352 2191 ntBASIC2.37□□□□□ -2.03
SHROOM3Q8TF72 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 RNU6-603P-201ENST00000411403 107 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AP001086.1-201ENST00000494882 321 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC008885.2-201ENST00000509506 930 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC025881.1-201ENST00000518851 512 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC021451.1-201ENST00000523498 1129 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 ZNF971P-201ENST00000562068 1249 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC010928.3-201ENST00000587712 541 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AP003117.1-201ENST00000602771 554 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AP000942.3-201ENST00000603702 160 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC024933.1-201ENST00000608472 348 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AL391262.2-201ENST00000622466 494 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC010608.3-201ENST00000625048 527 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 Y_RNA.508-201ENST00000384502 114 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 MIR525-201ENST00000384978 85 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 RNU6-1176P-201ENST00000390955 107 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 RNU6-932P-201ENST00000391108 106 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AL591416.1-201ENST00000404015 867 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AL354719.1-201ENST00000406535 843 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC241520.1-201ENST00000422654 1099 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 RPL7P31-201ENST00000450192 724 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms