Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AL390023.1-201ENST00000428836 262 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 HMGN2P21-201ENST00000447764 270 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AP000542.1-201ENST00000448473 371 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AL353691.1-201ENST00000451332 387 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 snoU109.4-201ENST00000458953 143 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AF131216.2-201ENST00000512316 564 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AC090877.1-201ENST00000561418 344 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AC006270.2-201ENST00000578523 652 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AC012669.1-201ENST00000603209 283 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 PRELID3BP8-201ENST00000604148 295 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AL031176.1-201ENST00000604554 466 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 SNORA62.6-201ENST00000606322 83 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AC073114.1-201ENST00000612027 490 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AL590099.1-201ENST00000615276 138 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 MIR7844-201ENST00000616161 122 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AL359757.2-201ENST00000624309 274 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP38Q8NB14 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP38Q8NB14 AL513185.3-201ENST00000433335 1300 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
USP38Q8NB14 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP38Q8NB14 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
USP38Q8NB14 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP38Q8NB14 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP38Q8NB14 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP38Q8NB14 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.11□□□□□ -1.75
USP38Q8NB14 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.11□□□□□ -1.75
USP38Q8NB14 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
USP38Q8NB14 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP38Q8NB14 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
USP38Q8NB14 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP38Q8NB14 HSPE1P8-201ENST00000406997 288 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 RN7SKP266-201ENST00000410232 287 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AL159169.1-201ENST00000421119 127 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AL365184.2-201ENST00000431139 435 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 SETP8-201ENST00000435341 628 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.11□□□□□ -1.75
USP38Q8NB14 ISCA1P2-201ENST00000438679 421 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AL512286.1-201ENST00000439244 400 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
USP38Q8NB14 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.11□□□□□ -1.75
USP38Q8NB14 MTND2P4-201ENST00000445034 1004 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.11□□□□□ -1.75
USP38Q8NB14 AC006480.1-201ENST00000449887 378 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 MTCO3P20-201ENST00000454926 688 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.11□□□□□ -1.75
USP38Q8NB14 RPL23AP62-201ENST00000463396 453 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.11□□□□□ -1.75
USP38Q8NB14 SETP11-201ENST00000473027 690 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AC021678.1-201ENST00000505195 936 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AC117522.2-201ENST00000510049 657 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AC010486.1-201ENST00000511793 424 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 RNU6-714P-201ENST00000516963 103 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.11□□□□□ -1.75
USP38Q8NB14 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.11□□□□□ -1.75
USP38Q8NB14 AP004242.1-201ENST00000533701 349 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AL121603.1-201ENST00000553815 142 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.11□□□□□ -1.75
USP38Q8NB14 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.11□□□□□ -1.75
USP38Q8NB14 U73023.1-201ENST00000603134 700 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 BRDTP1-201ENST00000605735 677 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AL031775.1-201ENST00000607014 887 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.11□□□□□ -1.75
USP38Q8NB14 AC091905.1-201ENST00000624400 311 ntBASIC4.11□□□□□ -1.75
USP38Q8NB14 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP38Q8NB14 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
USP38Q8NB14 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP38Q8NB14 AC090337.1-201ENST00000579651 2074 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AC006504.1-201ENST00000562493 3666 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
USP38Q8NB14 MFSD8-236ENST00000641509 4050 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
USP38Q8NB14 MIR423-201ENST00000362201 94 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 RNU1-33P-201ENST00000364249 162 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 RNU6-335P-201ENST00000364563 113 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 RNU6-629P-201ENST00000384061 103 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 RNU6-328P-201ENST00000390887 106 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 SNORA26.8-201ENST00000391306 124 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 RPL7P60-201ENST00000397636 735 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 UBE2V1P2-201ENST00000397758 440 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 RNU2-37P-201ENST00000410695 177 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 NPM1P11-201ENST00000417106 855 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 Z99497.1-201ENST00000421282 135 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.1□□□□□ -1.75
USP38Q8NB14 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.1□□□□□ -1.75
USP38Q8NB14 CYCSP4-201ENST00000429682 331 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.1□□□□□ -1.75
USP38Q8NB14 SKP1P1-201ENST00000438081 489 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms