Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AC018630.1-201ENST00000541376 925 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AC079089.3-201ENST00000603094 673 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AC011468.4-201ENST00000603942 409 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AC110741.2-201ENST00000605278 268 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AC138932.5-201ENST00000617759 563 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL161912.2-201ENST00000565707 3007 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 RNU6-335P-201ENST00000364563 113 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 SNORA73.2-201ENST00000364946 201 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 Y_RNA.359-201ENST00000365498 102 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 RNU6-114P-201ENST00000384704 105 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 MIR199A2-201ENST00000385289 110 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 EI24P1-201ENST00000416584 867 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 MTCO3P12-201ENST00000416718 547 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL139247.1-201ENST00000422768 325 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC092832.1-201ENST00000422934 400 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL353777.1-201ENST00000425552 326 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL133162.1-201ENST00000463228 453 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC093278.1-201ENST00000494700 600 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC109464.2-201ENST00000510242 943 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AP003467.2-201ENST00000520175 319 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AP004371.1-201ENST00000525240 214 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AGGF1P4-201ENST00000568249 801 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC012182.1-201ENST00000570133 895 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC009977.1-201ENST00000586015 570 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 UBE2L4-201ENST00000587688 464 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 SNRPGP15-201ENST00000600149 222 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL451064.1-201ENST00000607718 471 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC131902.3-201ENST00000611767 581 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC008250.2-201ENST00000615261 205 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AP001506.1-201ENST00000615444 211 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC009159.1-201ENST00000618386 642 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 MIR6075-201ENST00000620782 95 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL590240.3-201ENST00000621416 943 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL158801.5-201ENST00000623123 465 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC098679.4-201ENST00000624241 654 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AC010149.2-201ENST00000637608 315 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL365440.1-201ENST00000436135 2167 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 MTCO1P9-201ENST00000505577 1534 ntBASIC3.53□□□□□ -1.84
BEST3Q8N1M1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
BEST3Q8N1M1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 SNORA71.3-201ENST00000362582 128 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RNU6-1078P-201ENST00000364522 103 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 SNORA5A-201ENST00000384111 134 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 SNORD3H-201ENST00000384486 214 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RPL21P17-201ENST00000397467 475 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 FCF1P10-201ENST00000407590 479 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RNU2-16P-201ENST00000410712 136 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AC078974.1-201ENST00000411597 223 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RHEBP3-201ENST00000411920 351 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RPS3AP3-201ENST00000411933 242 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 MTND1P21-201ENST00000412991 285 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 CCDC58P2-201ENST00000417131 366 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 OR1AA1P-201ENST00000419597 916 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms