Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RNF135Q8IUD6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RNF135Q8IUD6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RNF135Q8IUD6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AC138393.1-203ENST00000327086 343 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AL121886.1-201ENST00000358609 435 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 Y_RNA.106-201ENST00000363189 100 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 RNU6-200P-201ENST00000364743 107 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 RNU1-43P-201ENST00000365052 165 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 MTCO3P19-201ENST00000415864 321 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AC016712.1-201ENST00000431088 378 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 RPL21P2-201ENST00000440049 481 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AC011816.1-201ENST00000441346 546 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 RNU7-187P-201ENST00000458985 68 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 RNU7-138P-201ENST00000459479 64 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 RPS23P3-201ENST00000470993 430 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 RPL31P60-201ENST00000478450 367 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 DUTP1-201ENST00000493631 470 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AC025465.3-201ENST00000510570 311 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AC025857.2-201ENST00000602711 238 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 Z98751.3-201ENST00000604447 521 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AC006484.1-201ENST00000435086 1884 ntBASIC5.85□□□□□ -1.47
RNF135Q8IUD6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF135Q8IUD6 AC109446.4-201ENST00000623235 2755 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 RNU6-770P-201ENST00000363929 105 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 Y_RNA.291-201ENST00000364886 113 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 RNU6-14P-201ENST00000384630 106 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 MIR517A-201ENST00000385001 87 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 AL590704.1-201ENST00000402856 794 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 RNU2-38P-201ENST00000410856 79 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 AC004866.2-201ENST00000438285 481 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 MRPL48P1-201ENST00000445390 636 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 RPL37P6-201ENST00000460682 294 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 AC114801.2-201ENST00000503825 781 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 RN7SKP234-201ENST00000517173 224 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 RPL10P14-201ENST00000565265 298 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 AC109446.1-201ENST00000566172 220 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 AC000095.2-202ENST00000637415 154 ntBASIC5.84□□□□□ -1.47
RNF135Q8IUD6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RNF135Q8IUD6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.84□□□□□ -1.48
RNF135Q8IUD6 AC104964.3-201ENST00000606115 2860 ntBASIC5.84□□□□□ -1.48
RNF135Q8IUD6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
RNF135Q8IUD6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
RNF135Q8IUD6 AC092747.4-201ENST00000620519 1861 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 Y_RNA.14-201ENST00000362415 103 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 Y_RNA.180-201ENST00000363867 113 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 RNU6-746P-201ENST00000384112 109 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 Y_RNA.477-201ENST00000384352 108 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 Y_RNA.480-201ENST00000384364 102 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 SNORA67-201ENST00000384423 137 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 MT-TW-201ENST00000387382 68 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AC097374.1-203ENST00000400783 485 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 RPL21P67-201ENST00000402896 478 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 DUTP5-201ENST00000406790 469 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 U3.36-201ENST00000408418 213 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 MIR1252-201ENST00000408861 65 ntBASIC5.83□□□□□ -1.48
RNF135Q8IUD6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF135Q8IUD6 AL138785.1-201ENST00000425821 331 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms