Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MTCO3P44-201ENST00000510977 541 ntBASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AC006499.6-201ENST00000511169 607 ntBASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 PHBP17-201ENST00000528576 541 ntBASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AL356432.3-201ENST00000568952 465 ntBASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 MIR3167-201ENST00000579623 85 ntBASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AC245389.1-201ENST00000605141 529 ntBASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AC017083.3-201ENST00000609955 700 ntBASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf139Q6ZV77 AC116667.1-201ENST00000604855 2072 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 RNU1-15P-201ENST00000353977 144 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 RNA5SP258-201ENST00000362750 119 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 Y_RNA.159-201ENST00000363674 87 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 RNU6-534P-201ENST00000364877 106 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 RNU6-483P-201ENST00000384088 108 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 U3.29-201ENST00000391296 212 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 FGF7P8-201ENST00000402994 292 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 RN7SKP159-201ENST00000410657 292 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 RPS23P10-201ENST00000416185 486 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 MTCO1P20-201ENST00000425366 358 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 RPS6P12-201ENST00000432491 726 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 MTCO3P18-201ENST00000440206 761 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC112653.1-201ENST00000443851 386 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 Z95327.1-201ENST00000446082 482 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 DPPA3P1-201ENST00000448050 469 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 RPL36AP13-201ENST00000457490 317 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 HMGB3P30-201ENST00000457863 606 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC010587.1-201ENST00000505809 469 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 SLC25A15P5-201ENST00000508033 253 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 NPM1P41-201ENST00000512920 831 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 Y_RNA.693-201ENST00000516641 110 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 Vault.3-201ENST00000516676 95 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 OR4R3P-201ENST00000525084 838 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AL157687.1-201ENST00000554853 619 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC099489.2-201ENST00000574976 260 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC022655.2-201ENST00000577280 318 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC090615.1-201ENST00000577519 154 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC011451.2-201ENST00000604303 598 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC121334.2-201ENST00000605387 271 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 LARP7P1-201ENST00000605576 316 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC069234.5-201ENST00000611056 416 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 MIR6875-201ENST00000617506 72 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 AC138915.3-201ENST00000562908 1389 ntBASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf139Q6ZV77 PABPC1P7-201ENST00000413177 1513 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AL359893.1-201ENST00000447628 1580 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms