Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL445984.1-201ENST00000637834 659 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 GNG5P1-201ENST00000255500 204 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 SNORD116-12-201ENST00000384468 92 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 SNORA40.2-201ENST00000390847 128 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AL024474.1-201ENST00000404655 591 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AL031121.1-201ENST00000406553 254 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 SNORD88.1-201ENST00000408684 91 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC104332.2-201ENST00000429959 156 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 HSFY7P-201ENST00000432672 318 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 HSFY8P-201ENST00000437934 318 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 NANOGNBP1-201ENST00000448444 480 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 HSFY5P-201ENST00000453726 309 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC092757.1-201ENST00000467293 467 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC104472.2-201ENST00000469035 601 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 RPS29P26-201ENST00000477483 171 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC069528.1-202ENST00000482888 637 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 SNORA31.1-201ENST00000515993 133 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 SNORA31.5-201ENST00000516190 133 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 RNA5SP76-201ENST00000516277 87 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 RNU6-1261P-201ENST00000517194 104 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC087808.1-201ENST00000520501 361 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 ERHP1-201ENST00000523006 310 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC021451.1-201ENST00000523498 1129 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AP001189.2-201ENST00000527320 189 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 AL133271.1-201ENST00000538229 291 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC008127.2-201ENST00000549925 1075 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC010653.1-201ENST00000571108 881 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 VN1R83P-201ENST00000595685 445 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC091057.3-201ENST00000602684 733 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC093732.2-201ENST00000607950 274 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC092953.2-201ENST00000608000 699 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AL133445.2-201ENST00000611191 527 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AL355810.1-201ENST00000614629 552 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC231759.1-201ENST00000616455 597 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 AC091046.2-201ENST00000620775 665 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 MKKS-204ENST00000639674 192 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGCS1Q01581 SGO1P2-201ENST00000429458 1589 ntBASIC2.7□□□□□ -1.98
HMGCS1Q01581 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 SNORA44-201ENST00000384584 132 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 RNU6-821P-201ENST00000390995 107 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 U3.29-201ENST00000391296 212 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 RPL21P32-201ENST00000419877 477 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC007435.1-201ENST00000421086 415 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 USP9YP36-201ENST00000424581 829 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 SDR42E1P3-201ENST00000438345 502 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC112653.1-201ENST00000443851 386 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 VN1R10P-201ENST00000447106 875 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC104164.3-201ENST00000467363 1258 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC103975.1-201ENST00000482506 483 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC083906.5-201ENST00000503722 328 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 AL391156.1-201ENST00000554965 554 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC015688.2-201ENST00000584523 262 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 ZNF861P-201ENST00000588126 639 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC073348.1-201ENST00000623002 331 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HMGCS1Q01581 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HMGCS1Q01581 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGCS1Q01581 AC244517.1-201ENST00000606030 2086 ntBASIC2.69□□□□□ -1.98
HMGCS1Q01581 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms