Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AIG1P1-201ENST00000503376 148 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 MTCYBP19-201ENST00000517463 1124 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 AC024560.3-201ENST00000608482 349 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
PRKDCP78527 SEPT7P7-201ENST00000420492 1301 ntBASIC1.28□□□□□ -2.2
PRKDCP78527 Y_RNA.251-201ENST00000364551 99 ntBASIC1.28□□□□□ -2.2
PRKDCP78527 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
PRKDCP78527 TOMM22P1-201ENST00000418578 312 ntBASIC1.28□□□□□ -2.2
PRKDCP78527 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.28□□□□□ -2.2
PRKDCP78527 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.28□□□□□ -2.2
PRKDCP78527 AMD1P1-201ENST00000457220 922 ntBASIC1.28□□□□□ -2.2
PRKDCP78527 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.28□□□□□ -2.2
PRKDCP78527 RN7SL793P-201ENST00000583259 296 ntBASIC1.28□□□□□ -2.2
PRKDCP78527 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.28□□□□□ -2.2
PRKDCP78527 FAM35CP-201ENST00000554755 2470 ntBASIC1.28□□□□□ -2.2
PRKDCP78527 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.28□□□□□ -2.2
PRKDCP78527 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
PRKDCP78527 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
PRKDCP78527 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.28□□□□□ -2.2
PRKDCP78527 COX6CP5-201ENST00000527162 228 ntBASIC1.28□□□□□ -2.2
PRKDCP78527 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.28□□□□□ -2.2
PRKDCP78527 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
PRKDCP78527 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
PRKDCP78527 SRIP3-201ENST00000413200 219 ntBASIC1.28□□□□□ -2.21
PRKDCP78527 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.28□□□□□ -2.21
PRKDCP78527 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.28□□□□□ -2.21
PRKDCP78527 MTND1P18-201ENST00000448191 573 ntBASIC1.28□□□□□ -2.21
PRKDCP78527 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.28□□□□□ -2.21
PRKDCP78527 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.28□□□□□ -2.21
PRKDCP78527 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
PRKDCP78527 AC015720.1-201ENST00000565251 277 ntBASIC1.28□□□□□ -2.21
PRKDCP78527 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.28□□□□□ -2.21
PRKDCP78527 AL035411.2-201ENST00000604022 421 ntBASIC1.28□□□□□ -2.21
PRKDCP78527 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
PRKDCP78527 AC244517.1-201ENST00000606030 2086 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
PRKDCP78527 TPMTP3-201ENST00000411928 735 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.27□□□□□ -2.21
PRKDCP78527 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.27□□□□□ -2.21
PRKDCP78527 AL049830.2-201ENST00000480072 201 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RN7SL274P-201ENST00000492268 272 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.27□□□□□ -2.21
PRKDCP78527 TTC39CP1-201ENST00000512513 755 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 AC107918.3-201ENST00000533272 382 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 MIR4448-201ENST00000584360 86 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PRKDCP78527 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.27□□□□□ -2.21
PRKDCP78527 RNU6-1320P-201ENST00000390838 107 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RNU6-1269P-201ENST00000391139 107 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.27□□□□□ -2.21
PRKDCP78527 AC129850.1-201ENST00000436203 508 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RNU6-599P-201ENST00000459383 107 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RNU6-1193P-201ENST00000459461 107 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.27□□□□□ -2.21
PRKDCP78527 VN1R79P-201ENST00000593540 513 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 AC009314.1-201ENST00000603871 304 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RNU6-84P-201ENST00000607737 102 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 VN1R7P-201ENST00000619242 903 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RNU6-368P-201ENST00000620928 107 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RNU6-538P-201ENST00000622329 107 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 MIR6715B-201ENST00000637172 77 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
PRKDCP78527 CDC27P3-201ENST00000635418 1910 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RNU6-146P-201ENST00000384602 108 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RNA5SP38-201ENST00000410750 119 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 RPL23AP44-201ENST00000482216 473 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.27□□□□□ -2.21
PRKDCP78527 AP000907.2-201ENST00000530827 353 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.27□□□□□ -2.21
PRKDCP78527 AC098848.2-201ENST00000588023 330 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 AC013562.2-201ENST00000611632 603 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.27□□□□□ -2.21
PRKDCP78527 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
PRKDCP78527 ZNF876P-202ENST00000398732 1485 ntBASIC1.27□□□□□ -2.21
PRKDCP78527 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
PRKDCP78527 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PRKDCP78527 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.26□□□□□ -2.21
PRKDCP78527 Y_RNA.393-201ENST00000383936 102 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 RNU6-1105P-201ENST00000384774 107 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 AC244505.4-201ENST00000434905 287 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 AL138799.3-201ENST00000438968 350 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 SSXP5-201ENST00000443473 287 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 AC078918.1-201ENST00000498515 228 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 SUMO2P6-201ENST00000505273 288 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.26□□□□□ -2.21
PRKDCP78527 CBX3P5-201ENST00000552017 521 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.26□□□□□ -2.21
PRKDCP78527 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.26□□□□□ -2.21
PRKDCP78527 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
PRKDCP78527 RNU1-22P-201ENST00000363334 158 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
PRKDCP78527 RNU1-139P-201ENST00000391307 165 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 AC006483.1-201ENST00000487308 313 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.26□□□□□ -2.21
PRKDCP78527 AL137100.2-201ENST00000555786 315 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 AP005137.2-201ENST00000609238 400 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms