Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TIMM9P3-201ENST00000428659 274 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP3BO95985 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.12□□□□□ -1.75
TOP3BO95985 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC007967.1-201ENST00000455422 1159 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 MEMO1P3-201ENST00000459811 302 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 MTCYBP18-201ENST00000501056 747 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.12□□□□□ -1.75
TOP3BO95985 ARL4AP2-201ENST00000507378 601 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC110792.2-201ENST00000510278 224 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 AC006499.2-201ENST00000513470 337 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 GMPSP1-201ENST00000514075 579 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 IGKV2-38-201ENST00000517443 247 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TOP3BO95985 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC009977.1-201ENST00000586015 570 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC008277.2-201ENST00000605196 797 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC128687.2-201ENST00000609657 566 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TOP3BO95985 AL442067.2-201ENST00000614033 363 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 AC010133.1-201ENST00000615809 842 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 AC104010.1-201ENST00000616889 150 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.12□□□□□ -1.75
TOP3BO95985 AC009033.1-201ENST00000624279 431 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 AL773545.4-201ENST00000637262 310 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
TOP3BO95985 AL513478.4-201ENST00000641636 310 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.12□□□□□ -1.75
TOP3BO95985 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TOP3BO95985 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TOP3BO95985 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
TOP3BO95985 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.12□□□□□ -1.75
TOP3BO95985 ZNF285B-201ENST00000561698 1767 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TOP3BO95985 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.11□□□□□ -1.75
TOP3BO95985 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TOP3BO95985 AC092326.2-201ENST00000624772 1561 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP3BO95985 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 MFSD8-242ENST00000641690 4199 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 RNU6-1009P-201ENST00000390996 107 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.11□□□□□ -1.75
TOP3BO95985 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP3BO95985 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP3BO95985 BX890604.2-201ENST00000427883 474 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 AC011742.1-201ENST00000431448 434 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP3BO95985 RPS6P12-201ENST00000432491 726 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 MTCYBP45-201ENST00000435243 565 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP3BO95985 RPS3AP14-201ENST00000483907 780 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.11□□□□□ -1.75
TOP3BO95985 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP3BO95985 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP3BO95985 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.11□□□□□ -1.75
TOP3BO95985 AC068587.4-201ENST00000533893 186 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.11□□□□□ -1.75
TOP3BO95985 HMGB1P33-201ENST00000563485 527 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 AC120057.2-201ENST00000571520 271 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 AC008752.3-201ENST00000588113 712 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 BNIP3P23-201ENST00000599655 511 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 AL139286.1-201ENST00000604465 483 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 MIR7702-201ENST00000621931 59 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 AC068880.5-201ENST00000624331 290 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 MTND1P37-201ENST00000636562 264 ntBASIC4.11□□□□□ -1.75
TOP3BO95985 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP3BO95985 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP3BO95985 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP3BO95985 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.11□□□□□ -1.75
TOP3BO95985 MTND5P17-201ENST00000418405 1603 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TOP3BO95985 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP3BO95985 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RNU6-534P-201ENST00000364877 106 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 XGY1-201ENST00000381172 446 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RNU6-533P-201ENST00000384144 107 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 SNORA51.6-201ENST00000384151 125 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RNU6-809P-201ENST00000384461 107 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms