Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CYCSP46-201ENST00000423569 204 ntBASIC3.43□□□□□ -1.86
SSX4O60224 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 AC244035.1-201ENST00000430042 390 ntBASIC3.43□□□□□ -1.86
SSX4O60224 AC129850.1-201ENST00000436203 508 ntBASIC3.43□□□□□ -1.86
SSX4O60224 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.43□□□□□ -1.86
SSX4O60224 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.43□□□□□ -1.86
SSX4O60224 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 COX6CP12-201ENST00000446748 202 ntBASIC3.43□□□□□ -1.86
SSX4O60224 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.43□□□□□ -1.86
SSX4O60224 AP1S2P1-201ENST00000457344 379 ntBASIC3.43□□□□□ -1.86
SSX4O60224 RPL36AP13-201ENST00000457490 317 ntBASIC3.43□□□□□ -1.86
SSX4O60224 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.43□□□□□ -1.86
SSX4O60224 TRBV12-2-201ENST00000489763 344 ntBASIC3.43□□□□□ -1.86
SSX4O60224 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SSX4O60224 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SSX4O60224 PCBP2P3-201ENST00000509726 843 ntBASIC3.43□□□□□ -1.86
SSX4O60224 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 RN7SKP289-201ENST00000517244 295 ntBASIC3.43□□□□□ -1.86
SSX4O60224 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.43□□□□□ -1.86
SSX4O60224 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 SNRPGP16-201ENST00000533275 226 ntBASIC3.43□□□□□ -1.86
SSX4O60224 ZNF192P1-203ENST00000565888 810 ntBASIC3.43□□□□□ -1.86
SSX4O60224 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.43□□□□□ -1.86
SSX4O60224 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 MIR5047-201ENST00000579212 100 ntBASIC3.43□□□□□ -1.86
SSX4O60224 MIR5684-201ENST00000585074 65 ntBASIC3.43□□□□□ -1.86
SSX4O60224 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX4O60224 MIR6868-201ENST00000611215 58 ntBASIC3.43□□□□□ -1.86
SSX4O60224 MIR7151-201ENST00000617477 60 ntBASIC3.43□□□□□ -1.86
SSX4O60224 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.43□□□□□ -1.86
SSX4O60224 AL139089.1-201ENST00000620372 975 ntBASIC3.43□□□□□ -1.86
SSX4O60224 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
SSX4O60224 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSX4O60224 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSX4O60224 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSX4O60224 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSX4O60224 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SSX4O60224 RNY4P24-201ENST00000362735 96 ntBASIC3.42□□□□□ -1.86
SSX4O60224 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.42□□□□□ -1.86
SSX4O60224 RNU6-283P-201ENST00000364788 107 ntBASIC3.42□□□□□ -1.86
SSX4O60224 U1.1-201ENST00000384101 164 ntBASIC3.42□□□□□ -1.86
SSX4O60224 PTMAP5-201ENST00000393073 333 ntBASIC3.42□□□□□ -1.86
SSX4O60224 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.42□□□□□ -1.86
SSX4O60224 HSPE1P26-201ENST00000405341 275 ntBASIC3.42□□□□□ -1.86
SSX4O60224 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSX4O60224 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSX4O60224 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.42□□□□□ -1.86
SSX4O60224 ARF4P2-201ENST00000430209 526 ntBASIC3.42□□□□□ -1.86
SSX4O60224 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.42□□□□□ -1.86
SSX4O60224 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSX4O60224 AL121871.1-201ENST00000443413 436 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AL133547.1-201ENST00000448546 220 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX4O60224 AC098824.1-201ENST00000453565 980 ntBASIC3.42□□□□□ -1.86
SSX4O60224 MTND1P9-201ENST00000453775 944 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX4O60224 UBDP1-202ENST00000457888 382 ntBASIC3.42□□□□□ -1.86
SSX4O60224 snoU13.22-201ENST00000459428 104 ntBASIC3.42□□□□□ -1.86
SSX4O60224 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSX4O60224 VN1R17P-201ENST00000472048 1090 ntBASIC3.42□□□□□ -1.86
SSX4O60224 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SSX4O60224 AC116337.2-201ENST00000477662 156 ntBASIC3.42□□□□□ -1.86
SSX4O60224 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.42□□□□□ -1.86
SSX4O60224 AC117522.2-201ENST00000510049 657 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX4O60224 TRMT10BP1-201ENST00000519377 943 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.42□□□□□ -1.86
SSX4O60224 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SSX4O60224 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX4O60224 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
SSX4O60224 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX4O60224 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX4O60224 ACTR3BP3-201ENST00000565577 979 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC012417.1-201ENST00000582307 1039 ntBASIC3.42□□□□□ -1.86
SSX4O60224 PIGPP4-201ENST00000584447 307 ntBASIC3.42□□□□□ -1.86
SSX4O60224 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC083760.1-201ENST00000589621 670 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC012065.4-201ENST00000602445 679 ntBASIC3.42□□□□□ -1.86
SSX4O60224 U73023.1-201ENST00000603134 700 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AP001330.4-201ENST00000604350 154 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.42□□□□□ -1.86
SSX4O60224 AL355810.1-201ENST00000614629 552 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AL450472.3-201ENST00000615578 367 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC012150.2-201ENST00000621300 544 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC244100.1-202ENST00000621554 382 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC039056.2-201ENST00000622261 511 ntBASIC3.42□□□□□ -1.86
SSX4O60224 AC004777.1-201ENST00000624317 287 ntBASIC3.42□□□□□ -1.86
SSX4O60224 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SSX4O60224 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSX4O60224 AL513185.3-201ENST00000433335 1300 ntBASIC3.42□□□□□ -1.86
SSX4O60224 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SSX4O60224 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SSX4O60224 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.42□□□□□ -1.86
SSX4O60224 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms