Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTCYBP23-201ENST00000558717 1102 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AGGF1P5-201ENST00000567900 919 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 MIR5708-201ENST00000579723 85 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTCO2P2-201ENST00000591258 225 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC007619.2-201ENST00000605743 379 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL359198.2-201ENST00000611836 194 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 DUXAP10-204ENST00000612052 616 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL020991.1-201ENST00000612314 373 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC098679.5-201ENST00000624394 571 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AP000568.1-201ENST00000282964 442 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNA5SP126-201ENST00000365092 109 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 SNORD116-12-201ENST00000384468 92 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 ERHP2-201ENST00000402323 299 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTATP6P20-201ENST00000414147 562 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPS3AP37-201ENST00000419176 745 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL513175.2-201ENST00000422071 443 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC233981.1-201ENST00000423224 461 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC092648.1-201ENST00000425870 423 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC114973.1-201ENST00000429057 632 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTND2P5-201ENST00000432656 1006 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 COX6CP2-201ENST00000444980 225 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 NIPA2P5-201ENST00000452282 464 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL109933.2-201ENST00000452651 260 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC108729.1-201ENST00000487812 947 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC079203.1-201ENST00000487972 404 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC114322.1-201ENST00000506771 926 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 HMGB3P15-201ENST00000507326 574 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTCYBP37-201ENST00000510642 1133 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPL7L1P13-201ENST00000511702 739 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 RN7SKP31-201ENST00000516354 278 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 SNORD59.2-201ENST00000516873 68 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC074029.1-201ENST00000552531 1044 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 HMGB1P6-201ENST00000569046 646 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC010653.1-201ENST00000571108 881 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AP001542.2-201ENST00000593141 364 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 NRBF2P5-201ENST00000603087 788 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC007318.2-201ENST00000620999 243 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC010149.2-201ENST00000637608 315 ntBASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
TMX2-CTNND1H3BSU7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 GABRG2-229ENST00000641017 3628 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 SNORD116.1-201ENST00000365628 92 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 SUGT1P1-201ENST00000379514 476 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU6-921P-201ENST00000384361 107 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU6-441P-201ENST00000384545 106 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL136133.1-201ENST00000413694 376 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 SSR1P2-201ENST00000415208 787 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPS3AP9-201ENST00000417027 792 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 Z75741.2-201ENST00000417272 1167 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC104332.2-201ENST00000429959 156 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC005345.1-201ENST00000431868 217 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms