Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 AL079343.1-201ENST00000572358 1771 ntBASIC3.33□□□□□ -1.88
SYCE3A1L190 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SYCE3A1L190 AL035425.3-201ENST00000564206 4996 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYCE3A1L190 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYCE3A1L190 DEFB108F-201ENST00000344638 222 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 RNA5SP50-201ENST00000363731 107 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 SNORA14A-201ENST00000364773 135 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 SNORA1.3-201ENST00000384676 136 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 MIR7-3-201ENST00000384898 110 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 MIR670-201ENST00000390142 98 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 RPS4XP3-201ENST00000398541 413 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AL031679.1-201ENST00000400616 525 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 RPS29P4-201ENST00000414733 161 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.32□□□□□ -1.88
SYCE3A1L190 AC069157.1-201ENST00000421749 137 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.32□□□□□ -1.88
SYCE3A1L190 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.32□□□□□ -1.88
SYCE3A1L190 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.32□□□□□ -1.88
SYCE3A1L190 USP9YP11-201ENST00000427537 717 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 RPL21P40-201ENST00000428586 483 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.32□□□□□ -1.88
SYCE3A1L190 AL590664.1-201ENST00000448065 339 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 ARPC3P5-201ENST00000448802 534 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 RPL37P4-201ENST00000448908 268 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AL162389.1-201ENST00000449233 177 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.32□□□□□ -1.88
SYCE3A1L190 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.32□□□□□ -1.88
SYCE3A1L190 AC103975.1-201ENST00000482506 483 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.32□□□□□ -1.88
SYCE3A1L190 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SYCE3A1L190 SLC25A15P5-201ENST00000508033 253 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.32□□□□□ -1.88
SYCE3A1L190 XKRY-201ENST00000510392 1100 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AC022483.1-201ENST00000514020 567 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AC093677.1-201ENST00000514414 678 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 RN7SKP157-201ENST00000516174 282 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.32□□□□□ -1.88
SYCE3A1L190 DEFB108D-201ENST00000527787 222 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYCE3A1L190 BNIP3P27-201ENST00000599991 412 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AP002826.1-201ENST00000608835 315 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 AC090115.4-201ENST00000609970 188 ntBASIC3.32□□□□□ -1.88
SYCE3A1L190 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SYCE3A1L190 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
SYCE3A1L190 AC005539.1-201ENST00000443768 1479 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 MTND4P9-201ENST00000507819 1346 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SYCE3A1L190 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SYCE3A1L190 FRG1BP-201ENST00000278882 761 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SYCE3A1L190 RNU6-413P-201ENST00000384115 107 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 MIR122-201ENST00000385044 85 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AL354719.1-201ENST00000406535 843 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 FAT1P1-201ENST00000406588 507 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 TIMM9P2-201ENST00000419324 266 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.31□□□□□ -1.88
SYCE3A1L190 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.31□□□□□ -1.88
SYCE3A1L190 FCF1P6-201ENST00000456841 595 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 RNU7-136P-201ENST00000458819 69 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AC104164.3-201ENST00000467363 1258 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.31□□□□□ -1.88
SYCE3A1L190 AC109464.2-201ENST00000510242 943 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.31□□□□□ -1.88
SYCE3A1L190 RNY4P37-201ENST00000516225 96 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 SNORA67.7-201ENST00000516664 135 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AC107016.2-201ENST00000547968 190 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SYCE3A1L190 AADACP1-206ENST00000561502 1193 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AC090615.1-201ENST00000577519 154 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 MTCO3P13-201ENST00000577757 781 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SYCE3A1L190 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
SYCE3A1L190 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AL357080.1-201ENST00000617394 239 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.31□□□□□ -1.88
SYCE3A1L190 AC011330.2-201ENST00000621680 635 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AL445264.1-201ENST00000621719 171 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AC009269.6-201ENST00000621778 588 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AC010338.1-201ENST00000621823 717 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 AC018692.3-201ENST00000623929 123 ntBASIC3.31□□□□□ -1.88
SYCE3A1L190 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.31□□□□□ -1.88
SYCE3A1L190 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SYCE3A1L190 AP003122.5-201ENST00000527668 3766 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SYCE3A1L190 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYCE3A1L190 RNU6-28P-201ENST00000362378 107 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 RNU1-33P-201ENST00000364249 162 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 RNU6-343P-201ENST00000364709 104 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 MIR449B-201ENST00000384995 97 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 ERHP2-201ENST00000402323 299 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 AL136310.1-201ENST00000404926 654 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 MTATP6P20-201ENST00000414147 562 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCE3A1L190 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCE3A1L190 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SYCE3A1L190 AC005019.1-201ENST00000436455 431 ntBASIC3.3□□□□□ -1.88
SYCE3A1L190 NDUFB4P6-201ENST00000436819 366 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms