Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CRYM-AS1-204ENST00000637983 556 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 LINC02211-204ENST00000642024 1070 ntBASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
NPIPA1Q9UND3 MTND4P9-201ENST00000507819 1346 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 NACA3P-201ENST00000359690 648 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 RNU1-70P-201ENST00000362618 164 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 RNA5SP383-201ENST00000362934 120 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 RNU1-101P-201ENST00000391171 127 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 SAR1AP2-201ENST00000392696 594 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AL136372.1-201ENST00000403060 228 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AL356131.1-201ENST00000405826 414 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 MRPL50P2-201ENST00000416821 482 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 RPL21P32-201ENST00000419877 477 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 COTL1P1-201ENST00000422309 375 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 BX890604.2-201ENST00000427883 474 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 MTCYBP45-201ENST00000435243 565 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 SNRPEP4-201ENST00000435815 279 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 MTND2P20-201ENST00000440805 661 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 ATP5C1P1-201ENST00000441945 895 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 OR6K5P-201ENST00000447050 945 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 RN7SL442P-201ENST00000473804 320 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC006483.1-201ENST00000487308 313 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 XKRY-201ENST00000510392 1100 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC119751.5-201ENST00000514077 770 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 RNU6-711P-201ENST00000517255 106 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AP001207.2-201ENST00000519490 539 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC022080.3-201ENST00000544433 482 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 LARP7P3-201ENST00000579888 337 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC008507.1-201ENST00000587506 734 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AL138478.1-201ENST00000612252 832 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC002076.2-201ENST00000617362 122 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC018692.3-201ENST00000623929 123 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC073476.4-201ENST00000628409 72 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AC097714.1-201ENST00000511272 1647 ntBASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.93□□□□□ -1.94
NPIPA1Q9UND3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC110774.1-201ENST00000623567 2018 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AL031679.1-201ENST00000400616 525 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 RPL5P18-201ENST00000406671 891 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 RPL32P35-201ENST00000415214 394 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 BEND7P1-201ENST00000422058 457 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 EZH2P1-201ENST00000431167 291 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 NANOGP2-201ENST00000435391 727 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AL358794.1-201ENST00000445689 381 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 RSL24D1P3-201ENST00000449255 495 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 RPS27P29-201ENST00000463110 252 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 RPS3AP14-201ENST00000483907 780 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC114981.1-201ENST00000503897 678 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 RNY4P37-201ENST00000516225 96 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC090136.1-201ENST00000520009 240 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 HSPA8P13-201ENST00000523715 472 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 MTCYBP23-201ENST00000558717 1102 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC004853.1-201ENST00000604902 698 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AL137843.1-201ENST00000605078 385 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AC097504.2-201ENST00000608088 454 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 TUG1_1.1-201ENST00000610654 145 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 DUXAP10-204ENST00000612052 616 ntBASIC2.92□□□□□ -1.94
NPIPA1Q9UND3 AL121895.2-201ENST00000619558 447 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms