Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SPA17P1-201ENST00000416656 452 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 USP9YP29-201ENST00000445112 563 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 MTND1P29-201ENST00000448112 647 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC135721.1-201ENST00000497954 479 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 RNU6-201P-201ENST00000517100 61 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC022968.1-201ENST00000567372 442 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 MTCYBP33-201ENST00000575007 1130 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 RN7SL703P-201ENST00000578485 302 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 MIR3690-201ENST00000580266 75 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC012443.1-201ENST00000605605 231 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC087752.4-201ENST00000605911 462 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC004908.2-201ENST00000609090 574 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 MIR6130-201ENST00000619419 109 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC019226.1-201ENST00000625666 515 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 Y_RNA.201-201ENST00000364052 96 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 MIR23B-201ENST00000384832 97 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 MIR19A-201ENST00000384878 82 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 SNORD115.1-201ENST00000391109 76 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 RNA5SP129-201ENST00000410276 118 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 RPL21P32-201ENST00000419877 477 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AL353777.1-201ENST00000425552 326 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 RPL35AP22-201ENST00000436855 335 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AF228730.2-201ENST00000438784 848 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AL049734.2-201ENST00000441066 616 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 RPL17P49-201ENST00000443728 411 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 RANP8-201ENST00000444720 713 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AL033528.1-201ENST00000453780 140 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 OR9M1P-201ENST00000459641 921 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 VN1R17P-201ENST00000472048 1090 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 ACTR3P3-201ENST00000480448 893 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC020893.1-201ENST00000502452 580 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 DEFB108D-201ENST00000527787 222 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC106785.1-201ENST00000565935 262 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC137800.2-201ENST00000574375 120 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC005771.1-201ENST00000585581 349 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC009977.1-201ENST00000586015 570 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC040904.1-201ENST00000590850 223 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC007687.1-201ENST00000602704 304 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC011468.4-201ENST00000603942 409 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC004067.1-201ENST00000608733 700 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC006023.2-201ENST00000609916 167 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC138749.5-201ENST00000611461 208 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC090970.3-201ENST00000612566 866 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC010678.1-201ENST00000614118 713 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC116165.2-201ENST00000616705 206 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AL139089.1-201ENST00000620372 975 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC095031.1-201ENST00000623685 672 ntBASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HCN3Q9P1Z3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC005832.2-201ENST00000538921 1430 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 RNU6-50P-201ENST00000362356 103 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 RNU5E-8P-201ENST00000363502 116 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms