Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 NACAP2-201ENST00000318548 624 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 RNA5SP372-201ENST00000390836 115 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC068050.1-201ENST00000394891 380 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AL109755.1-201ENST00000401791 649 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AL161631.1-201ENST00000417933 486 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 SDCBPP3-201ENST00000419629 891 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 BEND7P1-201ENST00000422058 457 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC005517.2-201ENST00000424673 553 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC005154.2-201ENST00000438110 379 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AL590399.6-201ENST00000446396 307 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC007537.2-201ENST00000472093 511 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 RPL21P103-201ENST00000479921 488 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 RPL7P23-201ENST00000493874 747 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 NIPA2P2-201ENST00000496376 1083 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC146944.2-203ENST00000502493 354 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC139495.1-202ENST00000513164 354 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 RN7SKP276-201ENST00000516242 268 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 RNU6-798P-201ENST00000516912 103 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 RNU6-1220P-201ENST00000517126 108 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC022690.1-201ENST00000526681 550 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AP000676.2-201ENST00000529711 301 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 MIR4646-201ENST00000580775 63 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 AL158211.4-201ENST00000606988 584 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 uc_338.18-201ENST00000615451 175 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 MIR7155-201ENST00000615925 56 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 MIR6130-201ENST00000619419 109 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 SDAD1P1-202ENST00000524156 2051 ntBASIC4.1□□□□□ -1.75
VSX1Q9NZR4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VSX1Q9NZR4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RPL7P26-201ENST00000333817 754 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 Y_RNA.813-201ENST00000364639 102 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 Y_RNA.367-201ENST00000365544 101 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RNA5SP151-201ENST00000365632 117 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RNU6-837P-201ENST00000391056 108 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RN7SKP32-201ENST00000410167 303 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RNU2-29P-201ENST00000410423 189 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RNU2-39P-201ENST00000410604 198 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RNU6-1068P-201ENST00000410958 103 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RPS20P15-201ENST00000412792 311 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 MTCO3P12-201ENST00000416718 547 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 ARL5AP1-201ENST00000418991 388 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 CYP4F29P-201ENST00000420685 446 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 OR4K11P-201ENST00000431829 904 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RPS15AP9-201ENST00000439856 381 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC010655.1-201ENST00000449336 292 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC006480.1-201ENST00000449887 378 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC234775.1-201ENST00000454247 670 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC079804.1-201ENST00000461922 436 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 RPL23AP11-201ENST00000475260 469 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC116562.3-201ENST00000506136 177 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC090151.1-201ENST00000520784 730 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC068587.5-201ENST00000528506 175 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 NCAPGP2-201ENST00000557911 754 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 OR4K8P-201ENST00000578842 1048 ntBASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.09□□□□□ -1.75
VSX1Q9NZR4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms