Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC005951.1-201ENST00000576706 485 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AC093227.2-201ENST00000589357 285 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 YWHAQP7-201ENST00000603536 658 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AC245297.2-201ENST00000610119 565 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 Z69908.1-201ENST00000622603 247 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 PCMTD1P7-201ENST00000634506 357 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 MTND5P28-201ENST00000438005 1594 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 SNRPEP3-201ENST00000338402 276 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 RNU6-433P-201ENST00000363216 104 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 RNU6-921P-201ENST00000384361 107 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AL355379.1-201ENST00000405542 640 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 RNU6-920P-201ENST00000410926 92 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 BX323014.1-201ENST00000412876 237 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 MTCO2P16-201ENST00000436962 677 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 FAM133DP-201ENST00000464802 691 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AL024509.2-201ENST00000493462 493 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 MTCYBP37-201ENST00000510642 1133 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 RNU2-58P-201ENST00000516403 183 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 NBR2-204ENST00000587322 63 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.78□□□□□ -1.8
UPF2Q9HAU5 HSPE1P14-201ENST00000605812 302 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AL161637.1-201ENST00000622380 412 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC091931.1-201ENST00000623488 728 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC048347.1-201ENST00000624621 427 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC092192.1-201ENST00000633154 1018 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC138649.5-201ENST00000637456 137 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 CDR1-202ENST00000625883 1485 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC118273.1-201ENST00000525324 3006 ntBASIC3.78□□□□□ -1.8
UPF2Q9HAU5 AC117529.2-201ENST00000512159 2068 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 RNA5SP124-201ENST00000362739 110 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 RNU4-24P-201ENST00000364565 139 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 RNU6-444P-201ENST00000383988 108 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 MIR1284-201ENST00000408337 120 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 RAB9AP3-201ENST00000412737 573 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 SYF2P2-201ENST00000417620 583 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 RPL36AP36-201ENST00000418616 301 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AC244035.1-201ENST00000430042 390 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AC010153.1-201ENST00000432862 727 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 LARP1BP3-201ENST00000437229 869 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 SETP5-201ENST00000437270 562 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 MTND2P20-201ENST00000440805 661 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AL359073.1-201ENST00000448036 403 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 RAB9AP1-201ENST00000449393 573 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 RPL31P3-201ENST00000458430 332 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 RNU6-488P-201ENST00000515918 99 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AC060788.1-201ENST00000521318 469 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 OR5B10P-201ENST00000532869 642 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AC090502.2-201ENST00000549267 280 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 MTCYBP28-201ENST00000566728 1132 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AC006270.2-201ENST00000578523 652 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 AL031667.3-201ENST00000620124 655 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.77□□□□□ -1.81
UPF2Q9HAU5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.77□□□□□ -1.81
UPF2Q9HAU5 MTCO1P24-201ENST00000515438 1558 ntBASIC3.76□□□□□ -1.81
UPF2Q9HAU5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPF2Q9HAU5 AC011477.1-204ENST00000623416 1325 ntBASIC3.76□□□□□ -1.81
UPF2Q9HAU5 ZNF833P-201ENST00000424938 1494 ntBASIC3.76□□□□□ -1.81
UPF2Q9HAU5 Y_RNA.25-201ENST00000362528 102 ntBASIC3.76□□□□□ -1.81
UPF2Q9HAU5 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPF2Q9HAU5 SNORD116-4-201ENST00000384733 96 ntBASIC3.76□□□□□ -1.81
UPF2Q9HAU5 MIR134-201ENST00000385258 73 ntBASIC3.76□□□□□ -1.81
UPF2Q9HAU5 MIR1250-201ENST00000408098 113 ntBASIC3.76□□□□□ -1.81
UPF2Q9HAU5 RN7SKP123-201ENST00000410732 291 ntBASIC3.76□□□□□ -1.81
UPF2Q9HAU5 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.76□□□□□ -1.81
UPF2Q9HAU5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.76□□□□□ -1.81
UPF2Q9HAU5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.76□□□□□ -1.81
UPF2Q9HAU5 TIMM9P2-201ENST00000419324 266 ntBASIC3.76□□□□□ -1.81
UPF2Q9HAU5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.76□□□□□ -1.81
UPF2Q9HAU5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.76□□□□□ -1.81
UPF2Q9HAU5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.76□□□□□ -1.81
UPF2Q9HAU5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.76□□□□□ -1.81
UPF2Q9HAU5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms