Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC43Q96MW1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CCDC43Q96MW1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC43Q96MW1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 RNA5SP374-201ENST00000362939 125 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AL590084.1-201ENST00000407885 387 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AL353705.1-201ENST00000433468 480 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 RPL18AP17-201ENST00000455326 198 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 RPL31P60-201ENST00000478450 367 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 RPL30P14-201ENST00000482744 348 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC006445.1-201ENST00000491925 405 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 XKRY-201ENST00000510392 1100 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC008837.2-201ENST00000513076 418 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC005951.1-201ENST00000576706 485 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 UBL5P2-201ENST00000583788 219 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 YPEL5P2-201ENST00000605553 359 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AL390208.1-201ENST00000605885 644 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC107294.3-201ENST00000609211 526 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AL138478.1-201ENST00000612252 832 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AC022509.4-201ENST00000621404 572 ntBASIC3.49□□□□□ -1.85
CCDC43Q96MW1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CCDC43Q96MW1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AL356473.1-201ENST00000406203 1408 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 FRG1BP-201ENST00000278882 761 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AL031679.1-201ENST00000400616 525 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 RPL7P25-201ENST00000404151 721 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 SDCBPP1-201ENST00000440192 890 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 RPL23AP76-201ENST00000441860 458 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AL592447.1-201ENST00000447592 540 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AL590664.1-201ENST00000448065 339 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AC104164.3-201ENST00000467363 1258 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AC017037.2-201ENST00000513850 890 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AC093677.1-201ENST00000514414 678 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 RNA5SP380-201ENST00000517190 98 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 DUXAP10-204ENST00000612052 616 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AL596245.1-201ENST00000618994 362 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 MIR8057-201ENST00000620957 69 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 LINC02211-204ENST00000642024 1070 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC43Q96MW1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.48□□□□□ -1.85
CCDC43Q96MW1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 RNU6-28P-201ENST00000362378 107 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 RNU5E-10P-201ENST00000363506 118 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 SNORA14A-201ENST00000364773 135 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 SNORA7.4-201ENST00000384249 137 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 SNORA1.3-201ENST00000384676 136 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 MIR483-201ENST00000385070 76 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 RPL21P3-201ENST00000395517 478 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 RNA5SP80-201ENST00000410475 111 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 MTCO2P5-201ENST00000422621 426 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AL139421.1-201ENST00000423010 169 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 THAP5P1-201ENST00000439089 262 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 MTCO1P53-201ENST00000441633 699 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AL671855.1-201ENST00000446875 1203 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AC016696.1-201ENST00000446949 318 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AC146507.2-201ENST00000460608 476 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AC104472.2-201ENST00000469035 601 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 RNY4P37-201ENST00000516225 96 ntBASIC3.47□□□□□ -1.85
CCDC43Q96MW1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC43Q96MW1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms