Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RNA5SP42-201ENST00000364278 115 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 SNORA73.2-201ENST00000364946 201 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 RNA5SP88-201ENST00000365560 109 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 RNA5SP283-201ENST00000365604 119 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFT1Q96AA3 RNA5SP424-201ENST00000390988 115 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 MIR1302-8-201ENST00000408342 128 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC098592.1-201ENST00000419352 333 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 COX6CP17-201ENST00000421389 185 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 BX119904.4-201ENST00000424402 301 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 AL354941.1-201ENST00000438600 464 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC108734.1-201ENST00000439549 399 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AP000542.1-201ENST00000448473 371 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 MTND1P9-201ENST00000453775 944 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC007967.1-201ENST00000455422 1159 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 UBDP1-202ENST00000457888 382 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 BET1P1-201ENST00000482276 359 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 MTCO1P35-201ENST00000515270 228 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC004024.1-201ENST00000549244 247 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 ISCA1P3-201ENST00000577104 373 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 PIGPP4-201ENST00000584447 307 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 VN1R90P-201ENST00000595717 726 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC107294.3-201ENST00000609211 526 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AL360219.1-201ENST00000610230 366 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AL607023.1-201ENST00000620045 248 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 MIR3974-201ENST00000637126 96 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC110774.1-201ENST00000623567 2018 ntBASIC3.18□□□□□ -1.9
RFT1Q96AA3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFT1Q96AA3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFT1Q96AA3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AL672167.1-206ENST00000356293 943 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 SNORA62-201ENST00000365493 153 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 ATP5F1P3-201ENST00000397213 657 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 MIR320C1-201ENST00000408566 88 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 RNA5SP31-201ENST00000411144 127 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 RNA5SP107-201ENST00000411358 122 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 RAP1BP1-201ENST00000412709 553 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFT1Q96AA3 HMGB3P23-201ENST00000414981 585 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 ZNF885P-201ENST00000420174 1098 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 USP9YP26-201ENST00000421008 661 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC011233.1-201ENST00000422812 283 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 OR8F1P-201ENST00000425243 930 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 C4BPAP2-201ENST00000428434 478 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC024082.2-201ENST00000434771 238 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 OR4C10P-201ENST00000434991 931 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC091862.1-201ENST00000438016 1100 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 CDC27P1-201ENST00000445384 715 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC108860.1-201ENST00000484521 383 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 RPS3AP22-201ENST00000488297 769 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AP001025.2-201ENST00000490908 477 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AL139099.1-201ENST00000497398 403 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC022447.3-201ENST00000506865 495 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 RNU6-1129P-201ENST00000515964 104 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 SCARNA14-201ENST00000516903 136 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC068587.4-201ENST00000533893 186 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms