Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 U1.39-201ENST00000621562 146 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC018692.3-201ENST00000623929 123 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC097714.1-201ENST00000511272 1647 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AP001350.1-201ENST00000601906 1524 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 OR1S2-201ENST00000302592 978 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 RPL23AP57-201ENST00000332361 466 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 SNORA7.4-201ENST00000384249 137 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AL031679.1-201ENST00000400616 525 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 TPMTP2-201ENST00000414372 726 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 NDUFB4P5-201ENST00000415445 361 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 MTCO3P12-201ENST00000416718 547 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 MTCYBP38-201ENST00000417160 1123 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AL953862.1-201ENST00000423016 168 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC012498.1-201ENST00000424037 437 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 MTND1P32-201ENST00000433043 938 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 MTND4LP10-201ENST00000435146 291 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 RPS3AP12-201ENST00000443616 753 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 ARPC3P5-201ENST00000448802 534 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 MTND2P19-201ENST00000449129 1012 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 RPS24P6-201ENST00000452670 400 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 ANKRD26P4-201ENST00000455755 950 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 RNU7-136P-201ENST00000458819 69 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC006445.1-201ENST00000491925 405 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC023424.2-201ENST00000493479 777 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 COX7A2P2-201ENST00000505291 250 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 RNU6-150P-201ENST00000516237 95 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 RNU6-1073P-201ENST00000517182 106 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 SNORA70.24-201ENST00000517233 118 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 MRPS36P3-201ENST00000519284 130 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC104027.1-201ENST00000521887 300 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC087481.2-201ENST00000565492 330 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 UBL5P2-201ENST00000583788 219 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC007687.1-201ENST00000602704 304 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC012669.1-201ENST00000603209 283 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 PRELID3BP8-201ENST00000604148 295 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 MIR8057-201ENST00000620957 69 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 AC004925.1-201ENST00000624256 2706 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 OR4G11P-202ENST00000642116 1414 ntBASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
C9orf40Q8IXQ3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 RPL7P26-201ENST00000333817 754 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 SNORA51.2-201ENST00000364595 132 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 SNORA9-201ENST00000384215 133 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 SNORA11.1-201ENST00000408133 129 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC007899.1-201ENST00000412776 775 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 MTCO2P5-201ENST00000422621 426 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC007742.1-201ENST00000425789 329 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 RPL21P66-201ENST00000426566 466 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 ELOCP26-201ENST00000436067 329 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 snoU13.24-201ENST00000458998 104 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 SNRPGP3-201ENST00000469405 227 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 FAM172BP-201ENST00000487497 1089 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC093281.2-201ENST00000510153 597 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 RN7SKP244-201ENST00000516513 307 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 RN7SKP287-201ENST00000516546 266 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms