Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
SIX1Q15475 AC073346.2-201ENST00000624724 2058 ntBASIC3.2□□□□□ -1.9
SIX1Q15475 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIX1Q15475 GDI2P1-201ENST00000429312 1336 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX1Q15475 MTCO1P23-201ENST00000415223 1526 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 ZNF734P-201ENST00000419494 1534 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIX1Q15475 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIX1Q15475 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIX1Q15475 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SIX1Q15475 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIX1Q15475 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIX1Q15475 AL035425.3-201ENST00000564206 4996 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SIX1Q15475 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SIX1Q15475 EI24P2-201ENST00000397776 1076 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 RPL7P8-201ENST00000411964 730 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX1Q15475 RPL31P45-201ENST00000419532 356 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 OFD1P18Y-201ENST00000420889 959 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 USP9YP26-201ENST00000421008 661 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX1Q15475 AL049610.1-201ENST00000423374 372 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AL365203.2-201ENST00000423444 196 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX1Q15475 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX1Q15475 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX1Q15475 USP9YP34-201ENST00000453983 808 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX1Q15475 snoU13.24-201ENST00000458998 104 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 RPL21P41-201ENST00000459863 264 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 RPL21P10-201ENST00000463521 490 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIX1Q15475 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX1Q15475 AL358832.1-201ENST00000497800 389 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC104685.1-201ENST00000502445 371 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX1Q15475 TMEM251P1-201ENST00000503717 318 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC093767.1-201ENST00000504523 156 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX1Q15475 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.19□□□□□ -1.9
SIX1Q15475 SNORA70.24-201ENST00000517233 118 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
SIX1Q15475 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX1Q15475 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX1Q15475 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX1Q15475 AC090616.2-202ENST00000584248 222 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX1Q15475 VN1R92P-201ENST00000598511 928 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX1Q15475 AC004987.4-201ENST00000603383 338 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AP000811.1-201ENST00000603803 651 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 BNIP3P11-201ENST00000603878 563 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC025588.3-201ENST00000604182 274 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AL161756.2-201ENST00000604597 246 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AL009028.1-201ENST00000604895 802 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC103710.3-201ENST00000608157 948 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC072039.2-201ENST00000608883 439 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC090116.1-201ENST00000615679 446 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 AC231657.1-201ENST00000624313 397 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 CYP3A51P-201ENST00000633513 256 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 DDX43P2-201ENST00000604753 1354 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIX1Q15475 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX1Q15475 GABRG2-229ENST00000641017 3628 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIX1Q15475 AP002907.1-201ENST00000606361 1430 ntBASIC3.19□□□□□ -1.9
SIX1Q15475 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIX1Q15475 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIX1Q15475 MTCO1P24-201ENST00000515438 1558 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 RNU6-374P-201ENST00000364146 108 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 RNVU1-14-201ENST00000384770 164 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 MIR181B1-201ENST00000385240 110 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 PTMAP5-201ENST00000393073 333 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIX1Q15475 CYCSP45-201ENST00000402289 315 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX1Q15475 OR1AA1P-201ENST00000419597 916 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC234781.2-201ENST00000426370 994 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.18□□□□□ -1.9
SIX1Q15475 AL035407.1-201ENST00000429211 571 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC097713.2-201ENST00000430199 356 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX1Q15475 RPL23AP74-201ENST00000437246 471 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX1Q15475 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX1Q15475 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX1Q15475 RPL23AP35-201ENST00000451906 501 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX1Q15475 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.18□□□□□ -1.9
SIX1Q15475 CEACAMP4-201ENST00000457676 421 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX1Q15475 RNU7-125P-201ENST00000458760 62 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 RPS4XP10-201ENST00000465034 731 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC146507.1-201ENST00000468335 354 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AP004217.1-201ENST00000480579 346 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX1Q15475 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms