Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.26□□□□□ -1.89
SCN1BQ07699 AC015726.1-201ENST00000602353 681 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC022022.2-201ENST00000602989 360 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.26□□□□□ -1.89
SCN1BQ07699 AL591034.3-201ENST00000605511 685 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 MIR6716-201ENST00000613413 80 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC023510.2-201ENST00000622162 746 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC112204.3-201ENST00000623822 332 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SCN1BQ07699 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN1BQ07699 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN1BQ07699 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN1BQ07699 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SCN1BQ07699 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCN1BQ07699 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCN1BQ07699 Y_RNA.18-201ENST00000362461 102 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 RNU6-1214P-201ENST00000363650 109 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 Y_RNA.302-201ENST00000364997 102 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AL590084.2-201ENST00000401481 382 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 MIR1305-201ENST00000408300 86 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.25□□□□□ -1.89
SCN1BQ07699 HMGB1P11-201ENST00000413899 637 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AL356095.1-201ENST00000417217 199 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AL512844.2-201ENST00000433990 593 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 UBE2FP3-201ENST00000436366 524 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 RPL35AP22-201ENST00000436855 335 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.25□□□□□ -1.89
SCN1BQ07699 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 OR6K1P-201ENST00000456766 971 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 RPS4XP2-201ENST00000458402 793 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AL135752.1-201ENST00000479477 471 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 KCTD9P5-201ENST00000504141 1170 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCN1BQ07699 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCN1BQ07699 AC087276.1-201ENST00000529659 480 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 HIGD1AP5-201ENST00000529959 259 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AP004247.1-201ENST00000531556 1289 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 MIR4999-201ENST00000585029 91 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.25□□□□□ -1.89
SCN1BQ07699 BNIP3P38-201ENST00000601117 544 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AC021171.1-201ENST00000603137 706 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCN1BQ07699 AC107294.3-201ENST00000609211 526 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 MIR6748-201ENST00000610433 71 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN1BQ07699 TUG1_2.1-201ENST00000614234 87 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AC006338.2-201ENST00000616864 791 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.25□□□□□ -1.89
SCN1BQ07699 MIR6500-201ENST00000622700 86 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AC073530.2-201ENST00000623987 261 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AL732372.2-225ENST00000642124 456 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCN1BQ07699 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.25□□□□□ -1.89
SCN1BQ07699 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.25□□□□□ -1.89
SCN1BQ07699 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SCN1BQ07699 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.25□□□□□ -1.89
SCN1BQ07699 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN1BQ07699 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SCN1BQ07699 AC092125.1-201ENST00000562568 1995 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AC126755.2-208ENST00000327792 462 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AC138969.1-213ENST00000331436 462 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 RNU1-64P-201ENST00000365443 163 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN1BQ07699 RNU6-769P-201ENST00000384407 104 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 MIR199A2-201ENST00000385289 110 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN1BQ07699 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN1BQ07699 RNA5SP31-201ENST00000411144 127 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.24□□□□□ -1.89
SCN1BQ07699 AC245291.1-201ENST00000419501 328 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 XKRYP1-201ENST00000423438 492 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 MTCO2P17-201ENST00000424336 677 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 RPL7P46-201ENST00000425129 740 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 C4BPAP2-201ENST00000428434 478 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 MTND1P20-201ENST00000430341 950 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.24□□□□□ -1.89
SCN1BQ07699 XKRYP2-201ENST00000432915 492 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 YWHAZP7-201ENST00000436906 631 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 FTH1P1-201ENST00000437933 532 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AL591719.1-201ENST00000444669 744 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AC114755.5-201ENST00000447760 831 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AC006480.1-201ENST00000449887 378 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AC099563.1-201ENST00000456086 418 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms