Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.14□□□□□ -2.23
HSPG2P98160 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.14□□□□□ -2.23
HSPG2P98160 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
HSPG2P98160 AC092447.7-201ENST00000422212 1621 ntBASIC1.14□□□□□ -2.23
HSPG2P98160 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.14□□□□□ -2.23
HSPG2P98160 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HSPG2P98160 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.14□□□□□ -2.23
HSPG2P98160 ARPC3P1-201ENST00000437218 533 ntBASIC1.14□□□□□ -2.23
HSPG2P98160 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.14□□□□□ -2.23
HSPG2P98160 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.14□□□□□ -2.23
HSPG2P98160 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.14□□□□□ -2.23
HSPG2P98160 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.14□□□□□ -2.23
HSPG2P98160 AC099778.2-201ENST00000610904 211 ntBASIC1.14□□□□□ -2.23
HSPG2P98160 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.13□□□□□ -2.23
HSPG2P98160 MAPK10-266ENST00000641066 6555 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
HSPG2P98160 AC019129.1-201ENST00000403786 261 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 RNU2-20P-201ENST00000410425 191 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.13□□□□□ -2.23
HSPG2P98160 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HSPG2P98160 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.13□□□□□ -2.23
HSPG2P98160 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.13□□□□□ -2.23
HSPG2P98160 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.13□□□□□ -2.23
HSPG2P98160 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.13□□□□□ -2.23
HSPG2P98160 AC234775.3-201ENST00000564612 656 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 AL078603.1-201ENST00000603824 313 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 OR10AB1P-201ENST00000609613 938 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 RNU6-1080P-201ENST00000383982 107 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 SNORA26.7-201ENST00000391288 122 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.13□□□□□ -2.23
HSPG2P98160 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.13□□□□□ -2.23
HSPG2P98160 AC244505.5-201ENST00000443639 207 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 AC090071.1-201ENST00000507713 644 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.13□□□□□ -2.23
HSPG2P98160 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.13□□□□□ -2.23
HSPG2P98160 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HSPG2P98160 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
HSPG2P98160 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
HSPG2P98160 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.13□□□□□ -2.23
HSPG2P98160 DPPA2P1-201ENST00000428060 556 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 MTCYBP37-201ENST00000510642 1133 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 COX6CP5-201ENST00000527162 228 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 AL355578.1-201ENST00000607405 1328 ntBASIC1.13□□□□□ -2.23
HSPG2P98160 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
HSPG2P98160 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HSPG2P98160 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.13□□□□□ -2.23
HSPG2P98160 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HSPG2P98160 UBE2L2-201ENST00000254302 429 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HSPG2P98160 RPL7P46-201ENST00000425129 740 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 CBWD4P-201ENST00000445695 655 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AC092155.2-201ENST00000454675 477 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 MTCYBP17-201ENST00000503579 789 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 MIR4421-201ENST00000578133 69 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AC002487.1-201ENST00000604565 994 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AC107294.3-201ENST00000609211 526 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HSPG2P98160 RN7SKP123-201ENST00000410732 291 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 HMGN2P19-201ENST00000425149 265 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.12□□□□□ -2.23
HSPG2P98160 HIGD1AP11-201ENST00000438361 280 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.12□□□□□ -2.23
HSPG2P98160 AC078918.1-201ENST00000498515 228 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 MIR4506-201ENST00000584693 77 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 OR4G1P-201ENST00000588632 938 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.12□□□□□ -2.23
HSPG2P98160 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
HSPG2P98160 AL353746.1-201ENST00000566293 6881 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 MIR548J-201ENST00000408833 112 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 RNU2-32P-201ENST00000411193 191 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 ARF4P2-201ENST00000430209 526 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.12□□□□□ -2.23
HSPG2P98160 HMGN1P7-201ENST00000491722 313 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 RPS15AP36-201ENST00000492022 382 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 TTC39CP1-201ENST00000512513 755 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.12□□□□□ -2.23
HSPG2P98160 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HSPG2P98160 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AC016957.1-201ENST00000534895 309 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.12□□□□□ -2.23
HSPG2P98160 VIS1.1-201ENST00000610517 203 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AC067852.7-201ENST00000623270 535 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HSPG2P98160 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HSPG2P98160 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.12□□□□□ -2.23
HSPG2P98160 RPS27AP18-201ENST00000515536 459 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 SNORA31.11-201ENST00000516528 139 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.12□□□□□ -2.23
HSPG2P98160 MIR151B-201ENST00000584249 96 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 AC024560.3-201ENST00000608482 349 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 SNORA50A-202ENST00000629536 136 ntBASIC1.12□□□□□ -2.23
HSPG2P98160 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
HSPG2P98160 RNU6-174P-201ENST00000410406 106 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 RPL23AP62-201ENST00000463396 453 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 MTND3P6-201ENST00000485242 339 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.11□□□□□ -2.23
HSPG2P98160 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.11□□□□□ -2.23
HSPG2P98160 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms