Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 MTND2P21-201ENST00000436242 1042 ntBASIC2.61□□□□□ -1.99
COL18A1P39060 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.61□□□□□ -1.99
COL18A1P39060 TPTE2P6-202ENST00000445572 1007 ntBASIC2.61□□□□□ -1.99
COL18A1P39060 AC092685.1-201ENST00000447960 1243 ntBASIC2.61□□□□□ -1.99
COL18A1P39060 AC090543.1-201ENST00000492168 485 ntBASIC2.61□□□□□ -1.99
COL18A1P39060 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.61□□□□□ -1.99
COL18A1P39060 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.61□□□□□ -1.99
COL18A1P39060 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.61□□□□□ -1.99
COL18A1P39060 MIR3683-201ENST00000580847 82 ntBASIC2.61□□□□□ -1.99
COL18A1P39060 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.61□□□□□ -1.99
COL18A1P39060 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.61□□□□□ -1.99
COL18A1P39060 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.61□□□□□ -1.99
COL18A1P39060 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.61□□□□□ -1.99
COL18A1P39060 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
COL18A1P39060 MIR489-201ENST00000384923 84 ntBASIC2.6□□□□□ -1.99
COL18A1P39060 HSPE1P26-201ENST00000405341 275 ntBASIC2.6□□□□□ -1.99
COL18A1P39060 MTCO3P4-201ENST00000419236 787 ntBASIC2.6□□□□□ -1.99
COL18A1P39060 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.6□□□□□ -1.99
COL18A1P39060 OR4K11P-201ENST00000431829 904 ntBASIC2.6□□□□□ -1.99
COL18A1P39060 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.6□□□□□ -1.99
COL18A1P39060 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.6□□□□□ -1.99
COL18A1P39060 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.6□□□□□ -1.99
COL18A1P39060 OR6C73P-201ENST00000546432 358 ntBASIC2.6□□□□□ -1.99
COL18A1P39060 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.6□□□□□ -1.99
COL18A1P39060 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.6□□□□□ -1.99
COL18A1P39060 AC060766.3-201ENST00000591442 263 ntBASIC2.6□□□□□ -1.99
COL18A1P39060 AC242628.1-201ENST00000606810 391 ntBASIC2.6□□□□□ -1.99
COL18A1P39060 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
COL18A1P39060 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.6□□□□□ -1.99
COL18A1P39060 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.6□□□□□ -1.99
COL18A1P39060 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
COL18A1P39060 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.6□□□□□ -1.99
COL18A1P39060 Y_RNA.355-201ENST00000365462 98 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.59□□□□□ -1.99
COL18A1P39060 U8.10-201ENST00000384260 133 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 MIR518E-201ENST00000385252 88 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 RNU2-37P-201ENST00000410695 177 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.59□□□□□ -1.99
COL18A1P39060 AC011753.1-201ENST00000451001 220 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.59□□□□□ -1.99
COL18A1P39060 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.59□□□□□ -1.99
COL18A1P39060 TBCAP3-201ENST00000512475 312 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 RNU2-58P-201ENST00000516403 183 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.59□□□□□ -1.99
COL18A1P39060 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.59□□□□□ -1.99
COL18A1P39060 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.59□□□□□ -1.99
COL18A1P39060 AC025260.1-201ENST00000548858 430 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.59□□□□□ -1.99
COL18A1P39060 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.59□□□□□ -1.99
COL18A1P39060 AC245128.3-201ENST00000594721 748 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 AC138649.5-201ENST00000637456 137 ntBASIC2.59□□□□□ -1.99
COL18A1P39060 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL18A1P39060 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.59□□□□□ -2
COL18A1P39060 RNU4-74P-201ENST00000411280 161 ntBASIC2.59□□□□□ -2
COL18A1P39060 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.59□□□□□ -2
COL18A1P39060 RFESDP1-201ENST00000422350 461 ntBASIC2.59□□□□□ -2
COL18A1P39060 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.59□□□□□ -2
COL18A1P39060 ATP5F1P1-201ENST00000433775 569 ntBASIC2.59□□□□□ -2
COL18A1P39060 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.59□□□□□ -2
COL18A1P39060 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.59□□□□□ -2
COL18A1P39060 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.59□□□□□ -2
COL18A1P39060 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.59□□□□□ -2
COL18A1P39060 AC110792.2-201ENST00000510278 224 ntBASIC2.59□□□□□ -2
COL18A1P39060 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.59□□□□□ -2
COL18A1P39060 AC126177.3-201ENST00000551839 688 ntBASIC2.59□□□□□ -2
COL18A1P39060 AC090751.1-201ENST00000566966 267 ntBASIC2.59□□□□□ -2
COL18A1P39060 AC073387.2-201ENST00000604797 784 ntBASIC2.59□□□□□ -2
COL18A1P39060 AL359821.1-201ENST00000605519 182 ntBASIC2.59□□□□□ -2
COL18A1P39060 MIR6864-201ENST00000617935 70 ntBASIC2.59□□□□□ -2
COL18A1P39060 OR1S1-201ENST00000624470 978 ntBASIC2.59□□□□□ -2
COL18A1P39060 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.59□□□□□ -2
COL18A1P39060 MIR4496-201ENST00000635896 61 ntBASIC2.59□□□□□ -2
COL18A1P39060 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
COL18A1P39060 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
COL18A1P39060 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.58□□□□□ -2
COL18A1P39060 SNORA31-201ENST00000362607 130 ntBASIC2.58□□□□□ -2
COL18A1P39060 RNA5SP189-201ENST00000364920 115 ntBASIC2.58□□□□□ -2
COL18A1P39060 DNAJC19P6-201ENST00000401853 280 ntBASIC2.58□□□□□ -2
COL18A1P39060 RNU4-62P-201ENST00000410125 130 ntBASIC2.58□□□□□ -2
COL18A1P39060 AIMP1P1-201ENST00000418670 937 ntBASIC2.58□□□□□ -2
COL18A1P39060 AL138799.3-201ENST00000438968 350 ntBASIC2.58□□□□□ -2
COL18A1P39060 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.58□□□□□ -2
COL18A1P39060 AC092451.1-201ENST00000480211 153 ntBASIC2.58□□□□□ -2
COL18A1P39060 MTAPP1-201ENST00000489154 819 ntBASIC2.58□□□□□ -2
COL18A1P39060 RNU4-60P-201ENST00000517239 135 ntBASIC2.58□□□□□ -2
COL18A1P39060 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.58□□□□□ -2
COL18A1P39060 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.58□□□□□ -2
COL18A1P39060 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
COL18A1P39060 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
COL18A1P39060 MIR4506-201ENST00000584693 77 ntBASIC2.58□□□□□ -2
COL18A1P39060 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
COL18A1P39060 AL670379.6-201ENST00000603753 252 ntBASIC2.58□□□□□ -2
COL18A1P39060 AL670379.11-201ENST00000604059 253 ntBASIC2.58□□□□□ -2
COL18A1P39060 AL670379.10-201ENST00000604330 253 ntBASIC2.58□□□□□ -2
COL18A1P39060 AC008162.1-201ENST00000604718 254 ntBASIC2.58□□□□□ -2
COL18A1P39060 AL670379.1-201ENST00000604752 252 ntBASIC2.58□□□□□ -2
COL18A1P39060 AL670379.2-201ENST00000604983 252 ntBASIC2.58□□□□□ -2
COL18A1P39060 AL670379.5-201ENST00000605253 252 ntBASIC2.58□□□□□ -2
COL18A1P39060 AL670379.4-201ENST00000605279 254 ntBASIC2.58□□□□□ -2
COL18A1P39060 AL670379.12-201ENST00000605291 253 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms