Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOEP02649 PABPC1P9-201ENST00000426076 1612 ntBASIC2.57□□□□□ -2
APOEP02649 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
APOEP02649 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOEP02649 Z82209.1-201ENST00000422141 2135 ntBASIC2.56□□□□□ -2
APOEP02649 CUL1P1-201ENST00000509510 2425 ntBASIC2.56□□□□□ -2
APOEP02649 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.56□□□□□ -2
APOEP02649 MIR518C-201ENST00000384822 101 ntBASIC2.56□□□□□ -2
APOEP02649 FAT1P1-201ENST00000406588 507 ntBASIC2.56□□□□□ -2
APOEP02649 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.56□□□□□ -2
APOEP02649 MTCO2P17-201ENST00000424336 677 ntBASIC2.56□□□□□ -2
APOEP02649 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.56□□□□□ -2
APOEP02649 FCF1P1-201ENST00000432690 571 ntBASIC2.56□□□□□ -2
APOEP02649 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.56□□□□□ -2
APOEP02649 RPS15AP7-201ENST00000439294 405 ntBASIC2.56□□□□□ -2
APOEP02649 MTND1P33-201ENST00000446251 917 ntBASIC2.56□□□□□ -2
APOEP02649 AL590664.1-201ENST00000448065 339 ntBASIC2.56□□□□□ -2
APOEP02649 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.56□□□□□ -2
APOEP02649 CBX3P3-201ENST00000508108 532 ntBASIC2.56□□□□□ -2
APOEP02649 OR5BN1P-201ENST00000532955 829 ntBASIC2.56□□□□□ -2
APOEP02649 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.56□□□□□ -2
APOEP02649 GLUD1P4-201ENST00000590914 418 ntBASIC2.56□□□□□ -2
APOEP02649 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.56□□□□□ -2
APOEP02649 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
APOEP02649 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.56□□□□□ -2
APOEP02649 AC092608.3-201ENST00000625017 386 ntBASIC2.56□□□□□ -2
APOEP02649 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.56□□□□□ -2
APOEP02649 CTSLP2-204ENST00000629029 392 ntBASIC2.56□□□□□ -2
APOEP02649 IGHVIII-44-202ENST00000636235 289 ntBASIC2.56□□□□□ -2
APOEP02649 CRYM-AS1-204ENST00000637983 556 ntBASIC2.56□□□□□ -2
APOEP02649 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
APOEP02649 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
APOEP02649 RNU6-1074P-201ENST00000383995 104 ntBASIC2.55□□□□□ -2
APOEP02649 RNU6-1151P-201ENST00000384684 107 ntBASIC2.55□□□□□ -2
APOEP02649 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
APOEP02649 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOEP02649 MTND4LP20-201ENST00000402379 270 ntBASIC2.55□□□□□ -2
APOEP02649 AL359511.1-201ENST00000402970 211 ntBASIC2.55□□□□□ -2
APOEP02649 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOEP02649 ATF1P1-201ENST00000406040 927 ntBASIC2.55□□□□□ -2
APOEP02649 RNU2-17P-201ENST00000410290 190 ntBASIC2.55□□□□□ -2
APOEP02649 UBE2V1P9-201ENST00000414760 368 ntBASIC2.55□□□□□ -2
APOEP02649 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.55□□□□□ -2
APOEP02649 RPL7P37-201ENST00000425095 738 ntBASIC2.55□□□□□ -2
APOEP02649 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.55□□□□□ -2
APOEP02649 DNAJC19P8-201ENST00000452887 259 ntBASIC2.55□□□□□ -2
APOEP02649 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.55□□□□□ -2
APOEP02649 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.55□□□□□ -2
APOEP02649 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
APOEP02649 NAMPTP2-201ENST00000505629 1115 ntBASIC2.55□□□□□ -2
APOEP02649 MTND3P24-201ENST00000506306 329 ntBASIC2.55□□□□□ -2
APOEP02649 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.55□□□□□ -2
APOEP02649 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.55□□□□□ -2
APOEP02649 RNU6-760P-201ENST00000516078 97 ntBASIC2.55□□□□□ -2
APOEP02649 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.55□□□□□ -2
APOEP02649 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.55□□□□□ -2
APOEP02649 AP000889.1-201ENST00000530968 660 ntBASIC2.55□□□□□ -2
APOEP02649 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.55□□□□□ -2
APOEP02649 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.55□□□□□ -2
APOEP02649 AC244517.1-201ENST00000606030 2086 ntBASIC2.55□□□□□ -2
APOEP02649 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.55□□□□□ -2
APOEP02649 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.55□□□□□ -2
APOEP02649 AC243829.7-201ENST00000633081 225 ntBASIC2.55□□□□□ -2
APOEP02649 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOEP02649 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
APOEP02649 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOEP02649 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.54□□□□□ -2
APOEP02649 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.54□□□□□ -2
APOEP02649 AL139276.1-201ENST00000311910 1001 ntBASIC2.54□□□□□ -2
APOEP02649 ENSAP3-201ENST00000312710 333 ntBASIC2.54□□□□□ -2
APOEP02649 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
APOEP02649 MIR449A-201ENST00000362113 91 ntBASIC2.54□□□□□ -2
APOEP02649 U8.8-201ENST00000365399 135 ntBASIC2.54□□□□□ -2
APOEP02649 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.54□□□□□ -2
APOEP02649 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
APOEP02649 RNU6-444P-201ENST00000383988 108 ntBASIC2.54□□□□□ -2
APOEP02649 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.54□□□□□ -2
APOEP02649 RNA5SP80-201ENST00000410475 111 ntBASIC2.54□□□□□ -2
APOEP02649 BOLA3P4-201ENST00000418151 400 ntBASIC2.54□□□□□ -2
APOEP02649 PAICSP7-201ENST00000419829 962 ntBASIC2.54□□□□□ -2
APOEP02649 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.54□□□□□ -2
APOEP02649 MLLT10P2-201ENST00000506434 249 ntBASIC2.54□□□□□ -2
APOEP02649 PRELID3BP4-201ENST00000515476 571 ntBASIC2.54□□□□□ -2
APOEP02649 RNA5SP24-201ENST00000516478 95 ntBASIC2.54□□□□□ -2
APOEP02649 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.54□□□□□ -2
APOEP02649 AP000790.1-201ENST00000528891 737 ntBASIC2.54□□□□□ -2
APOEP02649 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOEP02649 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.54□□□□□ -2
APOEP02649 AC027176.1-201ENST00000560204 514 ntBASIC2.54□□□□□ -2
APOEP02649 AC022069.1-201ENST00000582910 658 ntBASIC2.54□□□□□ -2
APOEP02649 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.54□□□□□ -2
APOEP02649 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
APOEP02649 AC010620.2-201ENST00000600135 313 ntBASIC2.54□□□□□ -2
APOEP02649 HSPE1P7-201ENST00000604681 321 ntBASIC2.54□□□□□ -2
APOEP02649 AC025034.2-201ENST00000623264 286 ntBASIC2.54□□□□□ -2
APOEP02649 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
APOEP02649 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
APOEP02649 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOEP02649 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
APOEP02649 AC080100.1-201ENST00000624239 5356 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms