Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR554-201ENST00000384874 96 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SLC28A1O00337 RNU6-757P-201ENST00000410334 100 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 RPL27AP8-201ENST00000424277 446 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 AC233728.2-201ENST00000425348 757 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 FTH1P1-201ENST00000437933 532 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 ATP5C1P1-201ENST00000441945 895 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC28A1O00337 PAXBP1P1-201ENST00000449315 447 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC28A1O00337 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC28A1O00337 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SLC28A1O00337 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SLC28A1O00337 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC28A1O00337 AC020699.1-201ENST00000505161 445 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC28A1O00337 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC28A1O00337 RNA5SP216-201ENST00000516111 123 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 SCARNA20.6-201ENST00000517251 106 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 DEFB108D-201ENST00000527787 222 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 OR5B10P-201ENST00000532869 642 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC28A1O00337 AC087465.1-201ENST00000560574 245 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC28A1O00337 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC28A1O00337 AP001429.1-201ENST00000602568 530 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 AL596327.1-201ENST00000603629 213 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 AC009570.1-201ENST00000609599 745 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 AL157817.1-201ENST00000614264 790 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SLC28A1O00337 MIR6130-201ENST00000619419 109 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SLC28A1O00337 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC28A1O00337 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
SLC28A1O00337 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
SLC28A1O00337 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC28A1O00337 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC28A1O00337 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SLC28A1O00337 CUL1P1-201ENST00000509510 2425 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC28A1O00337 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC28A1O00337 FAM133CP-201ENST00000332869 704 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC28A1O00337 RNU6-1207P-201ENST00000384343 107 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AL356421.1-201ENST00000403255 413 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 FAT1P1-201ENST00000406588 507 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC28A1O00337 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC28A1O00337 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC28A1O00337 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC28A1O00337 SNORD121B-201ENST00000458838 81 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 SNORD11.1-201ENST00000459482 85 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AC020898.1-201ENST00000474167 787 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AC010265.1-201ENST00000513509 211 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 RNA5SP380-201ENST00000517190 98 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 TRMT10BP1-201ENST00000519377 943 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AC239860.2-201ENST00000525886 270 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC28A1O00337 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AC106785.1-201ENST00000565935 262 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AGGF1P5-201ENST00000567900 919 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC28A1O00337 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AC090186.1-201ENST00000605991 572 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AL158211.4-201ENST00000606988 584 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AC107294.3-201ENST00000609211 526 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AL450472.3-201ENST00000615578 367 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC28A1O00337 AL392088.2-201ENST00000637607 285 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC28A1O00337 ZNF876P-202ENST00000398732 1485 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC28A1O00337 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC28A1O00337 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC28A1O00337 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.14□□□□□ -1.91
SLC28A1O00337 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC28A1O00337 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC28A1O00337 RNA5SP119-201ENST00000362715 117 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC28A1O00337 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
SLC28A1O00337 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC28A1O00337 Y_RNA.548-201ENST00000384656 105 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 RNA5SP229-201ENST00000410809 99 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AC007899.1-201ENST00000412776 775 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 RPL36AP36-201ENST00000418616 301 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms