Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
PdfS4R2K0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
PdfS4R2K0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
PdfS4R2K0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.55□□□□□ -0.4
PdfS4R2K0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.55□□□□□ -0.4
PdfS4R2K0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
PdfS4R2K0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
PdfS4R2K0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PdfS4R2K0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PdfS4R2K0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.54□□□□□ -0.4
PdfS4R2K0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.54□□□□□ -0.4
PdfS4R2K0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
PdfS4R2K0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.54□□□□□ -0.4
PdfS4R2K0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.54□□□□□ -0.4
PdfS4R2K0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.54□□□□□ -0.4
PdfS4R2K0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
PdfS4R2K0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
PdfS4R2K0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
PdfS4R2K0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdfS4R2K0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.53□□□□□ -0.4
PdfS4R2K0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.53□□□□□ -0.4
PdfS4R2K0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PdfS4R2K0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.53□□□□□ -0.4
PdfS4R2K0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.53□□□□□ -0.4
PdfS4R2K0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
PdfS4R2K0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
PdfS4R2K0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
PdfS4R2K0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PdfS4R2K0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.53□□□□□ -0.4
PdfS4R2K0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PdfS4R2K0 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.52□□□□□ -0.4
PdfS4R2K0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PdfS4R2K0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PdfS4R2K0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PdfS4R2K0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PdfS4R2K0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PdfS4R2K0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PdfS4R2K0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PdfS4R2K0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.52□□□□□ -0.41
PdfS4R2K0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Gm11249-201ENSMUST00000117071 859 ntBASIC12.52□□□□□ -0.41
PdfS4R2K0 Gm15378-201ENSMUST00000121894 207 ntBASIC12.52□□□□□ -0.41
PdfS4R2K0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms