Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Odf3b-204ENSMUST00000227834 930 ntBASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
H2afb1S4R1E0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Gm7791-201ENSMUST00000219066 539 ntBASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb1S4R1E0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb1S4R1E0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms