Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Chchd1-203ENSMUST00000224633 557 ntBASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac6Q9Z2V5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac6Q9Z2V5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac6Q9Z2V5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac6Q9Z2V5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac6Q9Z2V5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Gm10576-201ENSMUST00000191927 825 ntBASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac6Q9Z2V5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.38■□□□□ 0.85
Hdac6Q9Z2V5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac6Q9Z2V5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Gm45167-201ENSMUST00000208007 322 ntBASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac6Q9Z2V5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms