Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h3Q9Z0Y9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 AW822252-206ENSMUST00000208904 237 ntBASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h3Q9Z0Y9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h3Q9Z0Y9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Gm2651-201ENSMUST00000203560 838 ntBASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h3Q9Z0Y9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Gm7862-201ENSMUST00000121461 292 ntBASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms