Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcb1Q9Z0H3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcb1Q9Z0H3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcb1Q9Z0H3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcb1Q9Z0H3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Gm18733-201ENSMUST00000173950 856 ntBASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Mir6404-201ENSMUST00000183699 94 ntBASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcb1Q9Z0H3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Gm7862-201ENSMUST00000121461 292 ntBASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Gm25406-201ENSMUST00000157599 105 ntBASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Gm6296-201ENSMUST00000222599 943 ntBASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcb1Q9Z0H3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcb1Q9Z0H3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcb1Q9Z0H3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms