Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ap4s1Q9WVL1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Gm13148-201ENSMUST00000118892 745 ntBASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Gm27000-201ENSMUST00000182943 842 ntBASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap4s1Q9WVL1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Gm2559-201ENSMUST00000201323 363 ntBASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap4s1Q9WVL1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.68■□□□□ 0.1
Ap4s1Q9WVL1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Gm10517-202ENSMUST00000192970 758 ntBASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Gm37025-201ENSMUST00000195159 829 ntBASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap4s1Q9WVL1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ap4s1Q9WVL1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap4s1Q9WVL1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ap4s1Q9WVL1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap4s1Q9WVL1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap4s1Q9WVL1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap4s1Q9WVL1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap4s1Q9WVL1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms