Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Auts2-212ENSMUST00000178555 309 ntBASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Gm27397-201ENSMUST00000184997 107 ntBASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Gm24513-201ENSMUST00000174964 138 ntBASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Mir5126-201ENSMUST00000175513 77 ntBASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Psmb5-202ENSMUST00000227257 622 ntBASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col13a1Q9R1N9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Gm4995-201ENSMUST00000117247 432 ntBASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col13a1Q9R1N9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms