Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RpgrQ9R0X5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RpgrQ9R0X5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RpgrQ9R0X5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RpgrQ9R0X5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RpgrQ9R0X5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
RpgrQ9R0X5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RpgrQ9R0X5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RpgrQ9R0X5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Gm11539-201ENSMUST00000119837 557 ntBASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Gm13436-201ENSMUST00000120418 567 ntBASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Gm13559-201ENSMUST00000120476 863 ntBASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RpgrQ9R0X5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Gm6433-201ENSMUST00000118634 875 ntBASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.59■□□□□ 0.25
RpgrQ9R0X5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RpgrQ9R0X5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RpgrQ9R0X5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RpgrQ9R0X5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RpgrQ9R0X5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.58■□□□□ 0.25
RpgrQ9R0X5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Gm15565-201ENSMUST00000118890 427 ntBASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Gm18959-201ENSMUST00000208954 655 ntBASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RpgrQ9R0X5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Gm43799-201ENSMUST00000201845 579 ntBASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RpgrQ9R0X5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms