Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Clcn2Q9R0A1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Gm16061-201ENSMUST00000122167 857 ntBASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Gm18032-201ENSMUST00000222541 538 ntBASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn2Q9R0A1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Gm7977-201ENSMUST00000193787 748 ntBASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn2Q9R0A1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Mir5130-201ENSMUST00000175160 84 ntBASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn2Q9R0A1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms